LOCUS       BC048097                1142 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens frataxin, mRNA (cDNA clone MGC:57199 IMAGE:5300379),
            complete cds.
ACCESSION   BC048097
VERSION     BC048097.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1142)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 106 Row: p Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 31742515.
FEATURES             Location/Qualifiers
     source          1..1142
                     /db_xref="H-InvDB:HIT000053290"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:57199 IMAGE:5300379"
                     /tissue_type="Brain, hypothalamus"
                     /clone_lib="NIH_MGC_96"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..1142
                     /gene="FXN"
                     /gene_synonym="FA"
                     /gene_synonym="FARR"
                     /gene_synonym="MGC57199"
                     /gene_synonym="X25"
                     /db_xref="GeneID:2395"
                     /db_xref="HGNC:HGNC:3951"
                     /db_xref="MIM:606829"
     CDS             32..664
                     /gene="FXN"
                     /gene_synonym="FA"
                     /gene_synonym="FARR"
                     /gene_synonym="MGC57199"
                     /gene_synonym="X25"
                     /codon_start=1
                     /product="frataxin"
                     /protein_id="AAH48097.1"
                     /db_xref="GeneID:2395"
                     /db_xref="HGNC:HGNC:3951"
                     /db_xref="MIM:606829"
                     /translation="MWTLGRRAVAGLLASPSPAQAQTLTRVPRPAELAPLCGRRGLRT
                     DIDATCTPRRASSNQRGLNQIWNVKKQSVYLMNLRKSGTLGHPGSLDETTYERLAEET
                     LDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPS
                     SGPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA"
BASE COUNT          301 a          284 c          267 g          290 t
ORIGIN      
        1 agggcggagc gggcggcaga cccggagcag catgtggact ctcgggcgcc gcgcagtagc
       61 cggcctcctg gcgtcaccca gcccggccca ggcccagacc ctcacccggg tcccgcggcc
      121 ggcagagttg gccccactct gcggccgccg tggcctgcgc accgacatcg atgcgacctg
      181 cacgccccgc cgcgcaagtt cgaaccaacg tggcctcaac cagatttgga atgtcaaaaa
      241 gcagagtgtc tatttgatga atttgaggaa atctggaact ttgggccacc caggctctct
      301 agatgagacc acctatgaaa gactagcaga ggaaacgctg gactctttag cagagttttt
      361 tgaagacctt gcagacaagc catacacgtt tgaggactat gatgtctcct ttgggagtgg
      421 tgtcttaact gtcaaactgg gtggagatct aggaacctat gtgatcaaca agcagacgcc
      481 aaacaagcaa atctggctat cttctccatc cagtggacct aagcgttatg actggactgg
      541 gaaaaactgg gtgtactccc acgacggcgt gtccctccat gagctgctgg ccgcagagct
      601 cactaaagcc ttaaaaacca aactggactt gtcttccttg gcctattccg gaaaagatgc
      661 ttgatgccca gccccgtttt aaggacatta aaagctatca ggccaagacc ccagcttcat
      721 tatgcagctg aggtctgttt tttgttgttg ttgttgttta ttttttttat tcctgctttt
      781 gaggacagtt gggctatgtg tcacagctct gtagaaagaa tgtgttgcct cctaccttgc
      841 ccccaagttc tgatttttaa tttctatgga agattttttg gattgtcgga tttcctccct
      901 cacatgatac cccttatctt ttataatgtc ttatgcctat acctgaatat aacaaccttt
      961 aaaaaagcaa aataataaga aggaaaaatt ccaggaggga aaatgaattg tcttcactct
     1021 tcattctttg aaggatttac tgcaagaagt acatgaagag cagctggtca acctgctcac
     1081 tgttctatct ccaaatgaga cacattaaag ggtagcctac aaatgtaaaa aaaaaaaaaa
     1141 aa
//