LOCUS BC047949 3398 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens family with sequence similarity 102, member A, mRNA
(cDNA clone IMAGE:5763298).
ACCESSION BC047949
VERSION BC047949.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3398)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3398)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42558263.
FEATURES Location/Qualifiers
source 1..3398
/db_xref="H-InvDB:HIT000053286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5763298"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 664 a 1072 c 918 g 744 t
ORIGIN
1 cccggggcct ctgtccttgg gtcccagtta tgcaacagtc agtcgaggct gtggggctgg
61 cccaggggct ttatctgtct ccctctccaa cttttgccaa gttacccttc tgggcttccg
121 ccagccagga gcccacactc cctcagccct cccacacgct cctctcacct cctagctggg
181 cttcgctgac ttgaacctgg ccgagtttgc gggctcgggc tccacggtgc gctgctgcct
241 gctcgaggga tatgacacga agaacactcg ccaggacaac tccatcctta aggtcaccat
301 tggtatgttc ctgctctctg gagatccctg cttcaagacg ccaccatcga ctgccaagtc
361 catctccatc ccaggccagg attcctccct gcagctgacg tgtaagggtg gtgggaccag
421 cagtgggggc agcagcacca actccctgac tgggtcccgg ccccccaagg ctcggcccac
481 tattctcagc tcagggctgc cagaggaacc cgaccagaac ctgtccagcc ctgaggaggt
541 gttccactct ggccactccc gcaactccag ctatgccagc cagcagtcca agatctccgg
601 ctacagcaca gagcactcgc gctcctccag cctctcagac ctgacgcacc gccgcaacac
661 gtccaccagc agcagcgcct ctgggggcct tggcatgacc gtggagggcc ctgagggcag
721 tgagcgggag caccggcccc cggagaagcc gccgcggcca ccccggcccc tgcatctgtc
781 cgatcgctct ttcaggcgga agaaggactc ggtggagagc cacccgacct gggtggacga
841 cacgcggatc gatgcggatg ccatcgtgga gaagatcgtg cagagccagg acttcacaga
901 tggcagcaac accgaggaca gcaacctccg gctgttcgtg agccgcgatg gctctgccac
961 gctgagcggc atccagcttg ccaccagggt ctcttctggg gtctacgagc cagttgtgat
1021 tgaaagccat tgaggagcag gtgtccgggc tggagaagag tcctgctttc tctggagtcc
1081 agacctgtat cattccatga ggaactttcc ccttcagatc acctctgcgc cacatctcat
1141 ccatgcctcc tccatgcact ccagtccaca ctccccgtag catcattcca ttgcccctcc
1201 catccatgct gggaccctcc tggcccacca aggcccaggc accactgtga atattctcct
1261 ctgaaccact agagggcagg ccaggcaggc caggcgggcc cgtgcagctt gtgggcaaga
1321 aggagctggc aaggaccggc gctgctggag actgacccag ccctctggct gaggacatgc
1381 agcagctcct aaatgtagag atgcctgtgg ctgagggggc ctctctacct gtgtccccac
1441 tcactccagg agcactggct ttggtcacgt cttagcagca gggccttgct ccgttgttcc
1501 cttgccctgg tggtgggggg gccagaccgc ctccggaatc ctgccacctg tgactgtctg
1561 actgcttagt gcttcagctg tcccttcctt gtgtcctggg ggacctgctg gcggcctctt
1621 cctgggagcc atgacctcag accccaccca cactccagat cgagacccct gcctcccccc
1681 ggcaaatgtc ctcccgctgc cttgcagcct gcactttgca catgctcacc cccagcacag
1741 tcccactggc ccctcacctc cccttccctg agctccttcc caaggactcc tggtcactgc
1801 ctgctgtgca gtcagaggcc cagggtccag cagcccggcg ggaacgggtg ctgcctcttc
1861 ctccagttag ctccagctca ggtctgagac ccgtgctgag aaaggtctga gcaccgaccg
1921 tgccctctgc ccagggctgg gtcctgagca gctggttttc ctgcaggaag gttggagcaa
1981 gcaaagtcct tctctgccct cagggtcagc tgcccagact ggggcggatg ccagagaggc
2041 aggtgggctg tggctggact ggtccggagc tggcttcctt accagaaaag cctcagcctt
2101 cctctggaag catcccccgt tctgggcaag ggggaagggc tcctttaagg ggtgtgcttt
2161 cccagtgggg agcagtctgg ccctgccccc tactaaagcc tctgctctca gcactttccc
2221 ccaagtcctt gtaacttgct tgaaggtggg ttctggctgc cagccagtcc ctggacaaac
2281 tctcctgccc cttttaaatt tcactcattt tgtataaacc cagcaggctg gtgtttactt
2341 agccctgtag cttttttcat tttttctttc cgtctttctt cttgagttca cggttcaata
2401 ttgcctcctc gccctggtga ggggaggtgc tgcttttctg ccccacctgc cggctggttc
2461 cagcagcgct ggggcccagc tggggggccg ggatgggggc ttctctctct gggaggggtg
2521 caggtgccct ccccaggctg ggagggttcc ttccctagct ccccatctgc ccccgctggt
2581 gagagttggg cttcttggtc ttggaactcc ctggcattgg gaacagagca tttccagcat
2641 ttgttgttgt tgttttactc acctaaccct tagaaaatga atgttagaag gtgcctgccg
2701 aggcgggaca gagtgtttgc tcgcgctgga gaaggctctg ctcagccctg agagtccctt
2761 cctgccccac cgatactggc actttaaaaa ggaagctgac cgcacagtgt ccagacgaat
2821 tggcccccag aagatgggga gttctgtcct gcccttctgt gtctgcgtga cctcacccag
2881 cctaggaggg aggtgcattc aggctagatt tgcctctcat tcaaagttct ggggctttgg
2941 gcggaaaaca gccagctttg gcgctgttgg ggagactcct ccagaccagg aaccccagaa
3001 ggagacagag cctgccacat cctcccacgc caggccctgg gccagggtga ttggactgag
3061 aatttggcca caaccaaatt gatgctggct ggaaccagag gccagaaagc ctggccttgt
3121 ccccatgtgg gagccctgtc ctcagccctc ttgtcccctt gagctcagtg aattcccacc
3181 aggtgcccac agctcctgga cttcaaattc tatatattga gagagttgga gagtatatca
3241 gagatatttt tggaaaggag ttggtctatg caatgtcagt ttggaatctt cttgaaagtt
3301 taatgttttt attaggagat ttaaagaaaa taaaggtcta caatatcaaa aaaaaaaaaa
3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//