LOCUS BC047933 2811 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 2, mRNA (cDNA clone
MGC:49838 IMAGE:5767816), complete cds.
ACCESSION BC047933
VERSION BC047933.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2811)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2811)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451863.
FEATURES Location/Qualifiers
source 1..2811
/db_xref="H-InvDB:HIT000053281"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49838 IMAGE:5767816"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2811
/gene="B3GNT2"
/gene_synonym="B3GN-T1"
/gene_synonym="B3GN-T2"
/gene_synonym="B3GNT"
/gene_synonym="B3GNT-2"
/gene_synonym="BETA3GNT"
/db_xref="GeneID:10678"
/db_xref="HGNC:HGNC:15629"
/db_xref="MIM:605581"
CDS 239..1432
/gene="B3GNT2"
/gene_synonym="B3GN-T1"
/gene_synonym="B3GN-T2"
/gene_synonym="B3GNT"
/gene_synonym="B3GNT-2"
/gene_synonym="BETA3GNT"
/codon_start=1
/product="UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 2"
/protein_id="AAH47933.1"
/db_xref="GeneID:10678"
/db_xref="HGNC:HGNC:15629"
/db_xref="MIM:605581"
/translation="MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIP
KEKFWKISTPPEAYWNREQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRV
TSVVTGFNNLPDRFKDFLLYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQA
IRESWGQESNAGNQTVVRVFLLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFF
NLSLKEVLFLRWVSTSCPDTEFVFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVI
HNAGPHRDKKLKYYIPEVVYSGLYPPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDV
YTGMCLQKLGLVPEKHKGFRTFDIEEKNKNNICSYVDLMLVHSRKPQEMIDIWSQLQS
AHLKC"
BASE COUNT 837 a 527 c 613 g 834 t
ORIGIN
1 ggcgcagcgg cagcggcagc agcggcaaca agtgccggag gctagcagag ccaagccgga
61 gcagtccctg ccgccgacac cgccgggccg cccgtccggg gcgccgcgca tggagcgtga
121 gctgcggcgg tcgccgggct gagccgcgcg gagcggccgg gacgtggatg tggccgcgat
181 ctcccgccct tgcccccgcc ccgccgagct ggagctgctc ccggacaaga tatgagaaat
241 gagtgttgga cgtcgaagaa taaagttgtt gggtatcctg atgatggcaa atgtcttcat
301 ttattttatt atggaagtct ccaaaagcag tagccaagaa aaaaatggaa aaggggaagt
361 aataataccc aaagagaagt tctggaagat atctacccct cccgaggcat actggaaccg
421 agagcaagag aagctgaacc ggcagtacaa ccccatcctg agcatgctga ccaaccagac
481 gggggaggcg ggcaggctct ccaatataag ccatctgaac tactgcgaac ctgacctgag
541 ggtcacgtcg gtggttacgg gttttaacaa cttgccggac agatttaaag actttctgct
601 gtatttgaga tgccgcaatt attcactgct tatagatcag ccggataagt gtgcaaagaa
661 acctttcttg ttgctggcga ttaagtccct cactccacat tttgccagaa ggcaagcaat
721 ccgggaatcc tggggccaag aaagcaacgc agggaaccaa acggtggtgc gagtcttcct
781 gctgggccag acacccccag aggacaacca ccccgacctt tcagatatgc tgaaatttga
841 gagtgagaag caccaagaca ttcttatgtg gaactacaga gacactttct tcaacttgtc
901 tctgaaggaa gtgctgtttc tcaggtgggt aagtacttcc tgcccagaca ctgagtttgt
961 tttcaagggc gatgacgatg tttttgtgaa cacccatcac atcctgaatt acttgaatag
1021 tttatccaag accaaagcca aagatctctt cataggtgat gtgatccaca atgctggacc
1081 tcatcgggat aagaagctga agtactacat cccagaagtt gtttactctg gcctctaccc
1141 accctatgca gggggagggg ggttcctcta ctccggccac ctggccctga ggctgtacca
1201 tatcactgac caggtccatc tctaccccat tgatgacgtt tatactggaa tgtgccttca
1261 gaaactcggc ctcgttccag agaaacacaa aggcttcagg acatttgata tcgaggagaa
1321 aaacaaaaat aacatctgct cctatgtaga tctgatgtta gtacatagta gaaaacctca
1381 agagatgatt gatatttggt ctcagttgca gagtgctcat ttaaaatgct aaaatagata
1441 caaactcaat tttgcataga aaggtgtatt ttgaatagtt cccatgttgt gttctcacac
1501 tagagtaatt tctatattaa accatgaaaa ttgcctttat gagtgatacc catttgaggg
1561 cctctaaacc cttcaatttg gtactcacgt gaagagggaa agcggaagat ggtaattttt
1621 tttatggatg atatggcagg atgattggtt ctgatcttac cggctagtgg tcatttttaa
1681 aaaacttgta ccctcttatc tgaaatcctg tttctggaat ttggccattt taagtgattt
1741 tgtttgccct cttctataat attcctactt cccataataa tgactgattt atttgtaatt
1801 caggtattta taaacctatt ggctacaaag actttgttaa acattatcca gtggttttcg
1861 tgaaatggaa ttatgtttat ttttatggga tttgggtaaa ttttaaattg tctagaaaac
1921 tgaaatttca gttgtcagtt gtggaattca gtttttcaat tgtggaaatt tcctgccacc
1981 ccaacagtat ttttgtgtgt taattaattt tgcaaaatga gaatcatggt gtgacactca
2041 tctaatttat cttgttgtga tgttatggtc ataataagga gaaagagggt ttaatttttc
2101 ttgtatttgg tttcctggtg gtatcatagt gtaattttag tatttgaaaa tcagtgtgat
2161 tccttaatgg ccaactgaag attgaattgc cgctaacaac catatcgtgt tagtgaattt
2221 tcaatatgga ccaggaaggc atatgtattt tgaacttgag tgaaaaggtt gaagttacag
2281 acttttgcat agatggtttg tcaatttaaa attccagaat ttattattgc catattttca
2341 catgctgctt atacaagatt attattgagt agtaactgct tccctgtcta tgtagaagtg
2401 cctgtgtttt tatttattgt tcagatcaaa gaccaaaaca ttttcttaaa tatattttat
2461 gtaatatttt atttgtatac agtgttgttg atgaaatatt taactagagc atgatatttt
2521 aaatgttaag gtgtaacata tgttaaataa aactgttatt tttgaatttt aaaatttgtt
2581 ttttgggggt atgaactact agagtttaaa attctgccaa actattactt atatgtacta
2641 ttgtgtaaca tactttcttg aaatattttt gtttatagaa ttgaaggttc ttatcagatg
2701 ggatactggg gactataaac aatggaaata aagccactgt atttttaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaagga aaaaaaaaaa aaaaaaaaaa g
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