LOCUS BC047902 1864 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens lactate dehydrogenase D, mRNA (cDNA clone MGC:57726
IMAGE:5762691), complete cds.
ACCESSION BC047902
VERSION BC047902.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1864)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37595755.
FEATURES Location/Qualifiers
source 1..1864
/db_xref="H-InvDB:HIT000053272"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57726 IMAGE:5762691"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1864
/gene="LDHD"
/gene_synonym="MGC57726"
/db_xref="GeneID:197257"
/db_xref="HGNC:HGNC:19708"
/db_xref="MIM:607490"
CDS 48..1571
/gene="LDHD"
/gene_synonym="MGC57726"
/codon_start=1
/product="lactate dehydrogenase D"
/protein_id="AAH47902.1"
/db_xref="GeneID:197257"
/db_xref="HGNC:HGNC:19708"
/db_xref="MIM:607490"
/translation="MARLLRSATWELFPWRGYCSQKAKGELCRDFVEALKAVVGGSHV
STAAVVREQHGRDESVHRCEPPDAVVWPQNVEQVSRLAALCYRQGVPIIPFGTGTGLE
GGVCAVQGGVCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRDSGLWFPVDPGA
DASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGRHFRFGFWPEIP
HHTAWYSPCVSLGRRKSAAGYNLTGLFVGSEGTLGLITATTLRLHPAPEATVAATCAF
PSVQAAVDSTVHILQAAVPVARIEFLDEVMMDACNRYSKLNCLVAPTLFLEFHGSQQA
LEEQLQRTEEIVQQNGASDFSWAKEAEERSRLWTARHNAWYAALATRPGCKGYSTDVC
VPISRLPEIVVQTKEDLNASGLTGSIVGHVGDGNFHCILLVNPDDAEELGRVKAFAEQ
LGRRALALHGTCTGEHGIGMGKRQLLQEEVGAVGVETMRQLKAVLDPQGLMNPGKVL"
BASE COUNT 381 a 566 c 596 g 321 t
ORIGIN
1 ggtcaccctg ccacccagtg ctcacaccct ctggccagtg cctggctatg gcccgactgc
61 tcaggtctgc aacctgggag ctgttcccct ggaggggcta ctgctcccag aaggcaaagg
121 gagagctctg cagggacttc gtagaggctc tgaaggccgt ggtgggcggc tcccacgtgt
181 ccactgccgc ggtggtccga gagcagcacg ggcgcgatga gtcggtgcac aggtgcgaac
241 ctcctgatgc tgtggtgtgg ccccagaacg tggagcaggt cagccggctg gcagccctgt
301 gctatcgcca aggtgtgccc atcatcccat tcggcaccgg caccgggctt gagggtggcg
361 tctgtgctgt gcagggcggc gtctgcgtta acctgacgca tatggaccga atcctggagc
421 tgaaccagga ggacttctct gtggtggtgg agccaggtgt cacccgcaaa gccctcaacg
481 cccacctgcg ggacagcggc ctctggtttc ccgtggaccc aggcgcggac gcctctctct
541 gtggcatggc ggccaccggg gcgtcgggga ccaacgcggt ccgctacggc accatgcggg
601 acaacgtgct caacctggag gtggtgctgc ccgacgggcg gctgctgcac acggcgggcc
661 gaggccggca tttccgcttc ggcttctggc cagaaatccc tcatcacaca gcctggtact
721 caccttgtgt gtccctggga cgtaggaaga gtgcagccgg ctacaacctc acggggctct
781 tcgtgggctc cgaggggacg ctgggcctca tcacagccac caccctgcgc ctgcaccctg
841 cccctgaggc cacagtggcc gccacgtgtg cgttccccag tgtccaggct gctgtggaca
901 gcactgtaca catcctccag gctgcagtgc ccgtagcccg cattgagttc ctggatgaag
961 tcatgatgga tgcctgcaac aggtacagca agctgaattg cttagtggcg cccacactct
1021 tcctggagtt ccatggctcc cagcaggcac tggaggagca gctgcagcgc acagaggaga
1081 tagtccagca gaacggagcc tctgacttct cctgggccaa ggaggccgag gagcgcagcc
1141 ggctttggac agcacggcac aatgcctggt acgcagccct ggccacgcgg ccaggctgca
1201 agggctactc cacggatgtg tgtgtgccca tctcccggct gccggagatc gtggtgcaga
1261 ccaaggagga tctgaatgcc tcaggactca caggaagcat tgtcgggcat gtgggtgacg
1321 gcaacttcca ctgcatcctg ctggtcaacc ctgatgacgc cgaggaactg ggcagggtca
1381 aggcttttgc agaacagctg ggcaggcggg cactggctct ccacggaacg tgcacggggg
1441 agcatggcat cggaatgggc aagcggcagc tgctgcagga ggaggtgggc gccgtgggcg
1501 tggagaccat gcggcagctc aaggccgtgc tagaccccca aggcctcatg aatccaggca
1561 aagtgctgtg aagggggtct gagcacttag cccacaagtt ccctgactac ggagccggtt
1621 ctggaacttt tcttcatgcc acggcccctg caaggaaata gatgctgagg cagtcttcct
1681 gccagcgagc ccactgtatc tgggcccaag gccagagggc ccagagagaa gcctgagcac
1741 cgtgttacct ccctggccct ctggctggcc ccaggagcct ttggttcagt aaacgaccca
1801 gggtggttcc cagcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaa
//