LOCUS BC047897 2616 bp mRNA linear HUM 22-APR-2003
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1, mRNA (cDNA clone IMAGE:4445650), partial cds.
ACCESSION BC047897
VERSION BC047897.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2616)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2616)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506224.
FEATURES Location/Qualifiers
source 1..2616
/db_xref="H-InvDB:HIT000098824"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4445650"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2616
/gene="PSMD1"
/gene_synonym="P112"
/gene_synonym="S1"
/db_xref="GeneID:5707"
CDS 85..>2616
/gene="PSMD1"
/gene_synonym="P112"
/gene_synonym="S1"
/codon_start=1
/product="PSMD1 protein"
/protein_id="AAH47897.1"
/db_xref="GeneID:5707"
/translation="MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDK
IEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA
KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRL
DVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQ
CLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIA
SVPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMA
IELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEW
LARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIH
ANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVT
GEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADAL
IESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGF
ILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY
VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAG
GHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMP
KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKKK"
BASE COUNT 775 a 517 c 616 g 708 t
ORIGIN
1 gtgaactgag cggcccctga gctgacagat acactgcgca gctggaacgg cgagcgagcc
61 gacgggcgag tgaggggcgc agccatgatc acctcggccg ctggaattat ttctcttctg
121 gatgaagatg aaccacagct taaggaattt gcactacaca aattgaatgc agttgttaat
181 gacttctggg cagaaatttc cgagtccgta gacaaaatag aggttttata cgaagatgaa
241 ggtttccgga gtcggcagtt tgcagcctta gtggcatcta aagtatttta tcacctgggg
301 gcttttgagg agtctctgaa ttatgctctt ggagcagggg acctcttcaa tgtcaatgat
361 aactctgaat atgtggaaac tattatagca aaatgcattg atcactacac caaacaatgt
421 gtggaaaatg cagatttgcc tgaaggagaa aaaaaaccaa ttgaccagag attggaaggc
481 atcgtaaata aaatgttcca gcgatgtcta gatgatcaca agtataaaca ggctattggc
541 attgctctgg agacacgaag actggacgtc tttgaaaaga ccatactgga gtcgaatgat
601 gtcccaggaa tgttagctta tagccttaag ctctgcatgt ctttaatgca gaataaacag
661 tttcggaata aagtactaag agttctagtt aaaatctaca tgaacttgga gaaacctgat
721 ttcatcaatg tttgtcagtg cttaattttc ttagatgatc ctcaggctgt gagtgatatc
781 ttagagaaac tggtaaagga agacaacctc ctgatggcat atcagatttg ttttgatttg
841 tatgaaagtg ctagccagca gtttttgtca tctgtaatcc agaatcttcg aactgttggc
901 acccctattg cttctgtgcc tggatccact aatacgggta ctgttccggg atcagagaaa
961 gacagtgact cgatggaaac agaagaaaag acaagcagtg catttgtagg aaagacacca
1021 gaagccagtc cagagcctaa ggaccagact ttgaaaatga ttaaaatttt aagtggtgaa
1081 atggctattg agttacatct gcagttctta atacgaaaca ataatacaga cctcatgatt
1141 ctaaaaaaca caaaggatgc agtacggaat tctgtatgtc atactgcaac cgttatagca
1201 aactctttta tgcactgtgg gacaaccagt gaccagtttc ttagagataa tttggaatgg
1261 ttagccagag ccactaactg ggcaaaattt actgctacag ccagtttggg tgtaattcat
1321 aagggtcatg aaaaagaagc attacagtta atggcaacat accttcccaa ggatacttct
1381 ccaggatcag cctatcagga aggtggaggt ctctatgcac taggtcttat tcatgccaat
1441 catggtggtg atataattga ctatctgctt aatcagctta agaacgccag caatgatatc
1501 gttagacacg gtggcagtct gggccttggt ttggcagcca tgggaactgc acgtcaagat
1561 gtttatgatt tgctaaaaac aaacctttat caggatgatg cagtaacagg ggaagcagct
1621 ggcctggccc taggtttggt tatgttgggc tctaaaaatg ctcaggctat tgaggacatg
1681 gttggttatg cacaagaaac tcaacatgag aagattctgc gtggtcttgc agttggcata
1741 gctttagtaa tgtatgggag gatggaagag gctgatgctc tcattgaatc tctctgtcgt
1801 gacaaggacc caattcttcg aaggtctgga atgtatactg tagccatggc ttattgtggc
1861 tctggtaaca acaaagcaat tcgacgcctg ctacatgttg ctgtaagtga tgttaatgat
1921 gatgtcagga gggcagcagt agaatcactt gggttcattc tattcagaac ccctgaacag
1981 tgcccaagtg ttgtctcttt gttgtcagag agttacaacc ctcatgtgcg ctacggagct
2041 gcaatggcct tggggatatg ctgtgctggt acaggaaaca aggaagccat taatttgcta
2101 gaaccaatga caaacgaccc cgtgaactac gtgaggcaag gggcactcat agcttcagct
2161 ctcatcatga tccagcagac tgaaatcact tgtccaaagg tgaatcagtt cagacagctg
2221 tattccaaag tcatcaatga taagcatgat gatgtcatgg ccaagtttgg cgctattctg
2281 gcccagggca tactggatgc aggtggtcat aatgtcacaa tctccttgca gtccaggact
2341 gggcatactc atatgccttc tgtggttggc gtccttgtat ttacccagtt ttggttctgg
2401 tttcctcttt cacacttcct gtcattggct tataccccta cctgtgtcat tggccttaac
2461 aaggacttaa agatgccgaa agttcagtat aaatcgaact gtaaaccatc cacatttgca
2521 tatcctgccc ctctggaagt accaaaagaa aaagaaaagg aaaaggtttc tactgctgta
2581 ttatctataa ctgccaaggc taaaaaaaaa aaaaaa
//