LOCUS BC047895 1508 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens CAP-GLY domain containing linker protein 1, mRNA (cDNA
clone IMAGE:5742243), partial cds.
ACCESSION BC047895
VERSION BC047895.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1508)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1508)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: i Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016917.
FEATURES Location/Qualifiers
source 1..1508
/db_xref="H-InvDB:HIT000098823"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5742243"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1508
/gene="CLIP1"
/gene_synonym="CLIP"
/gene_synonym="CLIP-170"
/gene_synonym="CLIP170"
/gene_synonym="CYLN1"
/db_xref="GeneID:6249"
/db_xref="HGNC:HGNC:10461"
/db_xref="MIM:179838"
CDS 162..>1508
/gene="CLIP1"
/gene_synonym="CLIP"
/gene_synonym="CLIP-170"
/gene_synonym="CLIP170"
/gene_synonym="CYLN1"
/codon_start=1
/product="CLIP1 protein"
/protein_id="AAH47895.1"
/db_xref="GeneID:6249"
/db_xref="HGNC:HGNC:10461"
/db_xref="MIM:179838"
/translation="MSMLKPSGLKAPTKILKPGSTALKTPTAVVAPVEKTISSEKASS
TPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGS
VAGVRYFQCEPLKGIFTRPSKLTRKVQAEDEANGLQTTPASRATSPLCTSTASMVSSS
PSTPSNIPQKPSQPAAKEPSATPPISNLTKTASESISNLSEAGSIKKGERELKIGDRV
LVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVH
KVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTG
LHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQK
SQISEDPENVRGHLTVWIFPLLTKIDHRLKCLLIYSKKKKKKKKKKKKKKKKKKKKK"
BASE COUNT 478 a 342 c 371 g 317 t
ORIGIN
1 cagcttctgg caggatatga gctgatgcct gccccgattc tacagacacc atgagattta
61 atccagagac tgacttcact atagaaccca cagttgtatc aatggttggg gaaagatagt
121 ggcaacaggc aaaggagaaa cagctctgac atacaaagaa aatgagtatg ctaaagccaa
181 gtgggcttaa ggcccccacc aagatcctga agcctggaag cacagctctg aagacaccta
241 cggctgttgt agctccagta gaaaaaacca tatccagtga aaaagcatca agcactccat
301 catctgagac tcaggaggaa tttgtggatg actttcgagt tggggagcga gtttgggtga
361 atggaaataa gcctggattt atccagtttc ttggagaaac ccagtttgca ccaggccagt
421 gggctggaat tgttttagat gaacccatag gcaagaacga tggttcggtg gcaggagttc
481 ggtatttcca gtgtgaacct ttaaagggca tatttacccg accttcaaag ttaacaagga
541 aggtgcaagc agaagatgaa gctaatggcc tgcagacaac gcccgcctcc cgagctactt
601 caccgctgtg cacttctacg gccagcatgg tgtcttcctc cccctccacc ccttcaaaca
661 tccctcagaa accatcacag ccagcagcaa aggaaccttc agctacgcct ccgatcagca
721 accttacaaa aactgccagt gaatctatct ccaacctttc agaggctggc tcaatcaaga
781 aaggagaaag agagctcaaa atcggagaca gagtattggt tggtggcact aaggctggtg
841 tagtccggtt tcttggggag accgactttg ccaaggggga gtggtgtggc gtggagttag
901 atgagccact tgggaagaat gatggcgctg ttgctggaac aaggtatttt cagtgtcaac
961 ccaaatatgg cttgttcgct cctgtccaca aagttaccaa gattggcttc ccttccacta
1021 caccagccaa agccaaggcc aacgcagtga ggcgagtgat ggcgaccacg tccgccagcc
1081 tgaagcgcag cccttctgcc tcttccctca gctccatgag ctcagtggcc tcctctgtga
1141 gcagcaggcc cagtcggaca ggactacatg tcctggaatt ggaagccaaa atggaccagc
1201 tgcgaacaat ggtggaagct gctgacaggg agaaggtgga gcttctcaac cagcttgaag
1261 aggagaaaag gaaggttgag gaccttcagt tccgggttga agaagaatca attaccaaag
1321 gtgatcttga gcaaaagagc cagatttctg aagatcctga gaatgtaaga gggcacttaa
1381 ctgtgtggat atttcccttg ttaacaaaga ttgatcacag attaaaatgc ttattgatat
1441 actcaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaa
//