LOCUS BC047879 2829 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens SHQ1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:57602 IMAGE:5541019), complete cds. ACCESSION BC047879 VERSION BC047879.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2829) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2829) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC047879.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: f Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56550032. FEATURES Location/Qualifiers source 1..2829 /db_xref="H-InvDB:HIT000053265" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57602 IMAGE:5541019" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2829 /gene="SHQ1" /gene_synonym="FLJ10539" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" CDS 59..1792 /gene="SHQ1" /gene_synonym="FLJ10539" /codon_start=1 /product="SHQ1 homolog (S. cerevisiae)" /protein_id="AAH47879.1" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" /translation="MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKP YFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRT AKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEEVSEIALNPQCHYGFGNLRSGVLQR LQDELSDVIDIKDPDFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPW WTDKYSKMMAFLEKSQEQENHATLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLI DILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLY RHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQK VKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCS SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG VRRNTAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTVQVSEPKGTTAVNRSNI QERDGCQTPNN" BASE COUNT 819 a 560 c 643 g 807 t ORIGIN 1 ggcgggaacg cggcggcagt gagagcgagc ggcgccggcc cttgcgtccg gtgcggcgat 61 gctgaccccg gcgttcgacc tcagccagga tccggacttc ctgactatcg ccatccgcgt 121 gccctacgcc cgggtctccg agttcgacgt ctacttcgag gggtctgact tcaagttcta 181 cgccaagcca tactttctca gattaaccct tcctggaaga attgtagaaa atggaagtga 241 gcaagggtcc tatgatgcag ataaaggaat ttttaccatt cgcctgccca aagaaacccc 301 tggccagcat tttgaggggc tgaacatgtt aactgctctt ctggcaccaa gaaaatccag 361 gacagcaaaa ccacttgtgg aagaaatagg tgcttctgag attcctgagg aagtagttga 421 cgatgaagag tttgattggg aaattgagca gacaccctgt gaagaggtat cagaaattgc 481 tttgaatccg cagtgccact atggatttgg aaacttacga tcaggagtgt tgcaacggtt 541 acaggatgaa ctgagtgatg ttattgatat taaggatcca gatttcaccc ctgcagctga 601 acgaagacag aagcgcctgg ccgctgagct ggccaagttt gatcctgatc attatctagc 661 tgactttttt gaagatgagg cgattgaaca gattttgaag tataatcctt ggtggactga 721 caaatattca aaaatgatgg cctttttgga aaagagtcag gaacaagaaa atcatgctac 781 attagtgtct ttttctgaag aagagaagta tcagctacga aaatttgtca ataaatctta 841 tctgctggac aagagagcct gtcgtcaagt gtgctacagt ttgattgata tccttctggc 901 atattgctat gaaacccgtg tcactgaagg agagaagaat gttgaatctg catggaatat 961 caggaaactg agtccaacac tatgctggtt tgagacttgg actaacgttc atgatatcat 1021 ggtgtctttt ggaagaaggg tgttgtgtta cccactctat cgccatttca agctggtgat 1081 gaaggcctac agggacacta taaagatatt gcaactgggt aaaagtgcag ttttaaagtg 1141 tctcctggat attcacaaaa tttttcagga aaatgaccca gcgtacatac tgaatgatct 1201 ctacatctca gactactgtg tgtggattca gaaagtcaaa tccaaaaagt tggcagctct 1261 tgcagaagcc ttaaaggaag tctcccttac aaaggcccag ctggggttag aactggaaga 1321 actagaagca gcagcactgc ttgtccagga ggaagaaact gcattaaaag cagcccattc 1381 agtttctggg cagcagacac tttgctccag ctctgaggca agtgattcgg aggactcaga 1441 cagcagcgtg tcatctggaa acgaagactc aggctcagat tcagaacaag atgaactcaa 1501 agatagtcca tctgagacag tcagttcttt gcaaggtccc tttcttgaag aaagcagtgc 1561 ctttcttatt gttgatggtg gagtacgcag aaacacagcc atccaggagt ctgatgccag 1621 tcagggaaag ccacttgcct cttcctggcc tcttggagtg tctgggcctc tgatagagga 1681 gcttggggaa caactgaaga ctacagttca ggtttctgaa cccaagggca ccactgctgt 1741 aaaccgcagc aatattcagg agagagacgg ctgtcagaca ccaaataatt gactcttagg 1801 tggttttatt cattgttgag aaatatggta gattgggttt catttaccga atgagaattc 1861 ttcattttca ctttgtaatt tttcttagta tatagtcagc ccactgtatt tgtgtgttcc 1921 acatctgtgg attcaaccaa ctgcagatca aaaatattga agaaaaaatc gcatctgtac 1981 caaacatgta cagacttttt tcttgttatt attctctaaa taatacagta tgacaactat 2041 ttccacagca tttacattgt attgggtaat ataagtaatc tagtgatgat ttaaactgtg 2101 caggaggatg tgggtaggtt atatgcaaat actgcaccat tttttatcag gggcttgagc 2161 atctgaggat tttagtatcc tcaggagtcc tggaaccaac cccccacaga tacggggaca 2221 actttatgac attgtttttc aaccaatgaa tgtttatacc ttttgttttc cttgccgcga 2281 ctgtgaagat aaagttcaaa agtattttta ccaaagtgta gctaatattt caagctgaaa 2341 ataatagttc tactgcccgt gtctccagaa tgtagagccc atcaatattt ttattttagg 2401 aggtgtactt gacacccaat aaactgcacg tatcaaaagt gtacaatgtg ttggcgtatg 2461 tataccctgc gtaaaactat caccacaact gaagtgagga acggacccat cattcccaag 2521 tgcccttgtg ccctgttatt agtttgcatg tcctagaatt ctatgtaaat tgaatcatac 2581 aatatgtatc ccttttttgg tcaggcatat tttactcagt atagttattt tgagattcat 2641 ccatgtggta gcatgtgtca cgagtttttg tttttatgtt tttcattgct gagtactgct 2701 tcattgaata gatttgttca ttgacctatc gatggacacc tgggttgttt ccagtttggg 2761 gctgttataa ataaagctgt tatgaacatt tgtgtacaag tcaaaaaaaa aaaaaaaaaa 2821 aaaaaaaaa //