LOCUS BC047873 2078 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens leucine rich repeat containing 48, mRNA (cDNA clone MGC:57559 IMAGE:5760028), complete cds. ACCESSION BC047873 VERSION BC047873.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2078) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2078) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: j Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33636688. FEATURES Location/Qualifiers source 1..2078 /db_xref="H-InvDB:HIT000053263" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57559 IMAGE:5760028" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2078 /gene="LRRC48" /gene_synonym="DKFZP586M1120" /db_xref="GeneID:83450" /db_xref="HGNC:HGNC:25384" CDS 219..1790 /gene="LRRC48" /gene_synonym="DKFZP586M1120" /codon_start=1 /product="leucine rich repeat containing 48" /protein_id="AAH47873.1" /db_xref="GeneID:83450" /db_xref="HGNC:HGNC:25384" /translation="MNQPCNSMEPRVMDDDMLKLAVGDQGPQEEAGQLAKQEGILFKD VLSLQLDFRNILRIDNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETI EGLDTLVNLEDLSLFNNRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRT LSLSRNPISEAEDYKMFICAYLPDLMYLDYWRIDDHTKKLAEAKHQYSIDELKHQENL MQAQLEDEQAQREELEKHKTAFVEHLNGSFLFDSMYAEDSEGNNLSYLPGVGELLETY KDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSS LSAIREELELPNIEKMILECSADISELFDALMTLEMQLVEQLEETINMFERNIVDMVG LFIENVQSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDLPNDLRALFVDKDTI VNAVGASHDIHLLKIDNREDELVTRINSWCTRLIDRIHKDEIMRNRKRVKEINQYIDH MQSELDNLECGDILD" BASE COUNT 631 a 509 c 538 g 400 t ORIGIN 1 ccttagcaac caagtcgcgg cgcttggttc cccagcaacc gggagacgcg tctgctgcgt 61 ggaaccgccg agttcccagc gcttgagaag gaaaattctg gatctgttat ctgtgaggag 121 gccactccgt tgacagttgt gtaaaactct gctgctttcc ccagctccaa cctctctggt 181 cttcaacaac actatcatca gggaaaacgt gggggaagat gaaccagccg tgcaactcga 241 tggagccgag ggtgatggac gatgacatgc tcaagctggc cgtcggggac cagggccccc 301 aggaggaggc cgggcagctg gccaagcagg agggcatcct cttcaaggat gtcctgtccc 361 tgcagctgga ctttcggaac atcctccgca tagacaacct ctggcagttt gagaacttga 421 ggaagctgca gctggacaat aacatcattg agaagatcga gggcctggag aacctcgcac 481 acctggtctg gctggatctg tctttcaaca acattgagac catcgagggg ctggacacac 541 tggtgaacct ggaggacctg agcttgttca acaaccggat ctccaagatc gactccctgg 601 acgccctcgt caagctgcag gtgttgtcgc tgggcaacaa ccggattgac aacatgatga 661 acatcatcta ccttcggcgg ttcaagtgcc tgcggacgct cagcctctct aggaacccta 721 tctctgaggc agaggattac aagatgttca tctgtgccta ccttcctgac ctcatgtacc 781 tggactactg gcgcattgat gaccacacaa aaaagcttgc ggaggctaag caccagtaca 841 gcatcgacga gctgaagcac caggagaacc tgatgcaggc ccagctggag gacgagcagg 901 cgcagcggga ggagctagag aagcacaaga ctgcgtttgt ggaacacctg aatggctcct 961 tcctgtttga cagcatgtac gctgaggact cagagggcaa caatctgtcc tacctgcctg 1021 gtgtcggtga gctccttgag acctacaagg acaagtttgt catcatctgc gtgaatattt 1081 ttgagtatgg cctgaaacag caggagaagc ggaaaacaga gcttgacacc ttcagtgaat 1141 gtgtccgtga ggccatccag gaaaaccagg agcagggcaa acgcaagatt gccaaattcg 1201 aggagaagca cttgtcgagt ttaagtgcca ttcgagagga gttggaactg cccaacattg 1261 agaagatgat cctagaatgc agtgctgaca tcagtgagtt gttcgatgcg ctcatgacgc 1321 tggagatgca gctggtggag cagctggagg agactataaa catgtttgaa aggaacattg 1381 ttgacatggt aggactgttt atcgaaaatg tccaaagcct gatggctcag tgccgggacc 1441 tggagaatca ccaccacgag aagctcctgg agatctctat cagcaccctg gagaagattg 1501 tcgagggcga cctggacgag gacctgccta acgacctgcg cgcgcttttt gtcgataaag 1561 atacgattgt taatgctgtc ggggcatcgc acgacatcca cctcctgaag attgacaatc 1621 gagaagatga gctggtgacc agaatcaact cttggtgtac acgtttaata gacaggattc 1681 acaaggatga gatcatgagg aaccgcaagc gcgtgaagga gatcaatcag tacatcgacc 1741 acatgcagag cgaactggac aacctggaat gtggcgacat cctagactag atgaatgtca 1801 gccacaggag cttcttcaaa acatagcacc agccccagcc aggagaagga agtgcacacg 1861 cctcacccgc acctctagag agttgctggg catctctcaa ccgcgatccc caacaccatt 1921 cttcccccac ccctggaaaa acttccaaaa gtagagaaaa taaaggactc atttcacaaa 1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //