LOCUS BC047866 2100 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 62, mRNA (cDNA clone
MGC:57512 IMAGE:6499979), complete cds.
ACCESSION BC047866
VERSION BC047866.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2100)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2100)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52627134.
FEATURES Location/Qualifiers
source 1..2100
/db_xref="H-InvDB:HIT000053259"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57512 IMAGE:6499979"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2100
/gene="C6orf62"
/gene_synonym="dJ30M3.2"
/gene_synonym="DKFZP564G182"
/gene_synonym="FLJ12619"
/gene_synonym="Nbla00237"
/gene_synonym="XTP12"
/db_xref="GeneID:81688"
/db_xref="HGNC:HGNC:20998"
CDS 199..888
/gene="C6orf62"
/gene_synonym="dJ30M3.2"
/gene_synonym="DKFZP564G182"
/gene_synonym="FLJ12619"
/gene_synonym="Nbla00237"
/gene_synonym="XTP12"
/codon_start=1
/product="chromosome 6 open reading frame 62"
/protein_id="AAH47866.1"
/db_xref="GeneID:81688"
/db_xref="HGNC:HGNC:20998"
/translation="MGDPNSRKKQALNRLRAQLRKKKESLADQFDFKMYIAFVFKEKK
KKSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSLELLQKDVVQLHAPRYQSMRR
DVIGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHV
LSRKDKTGIVVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGT
IEDHLRPYMPE"
BASE COUNT 661 a 354 c 411 g 674 t
ORIGIN
1 tgtttcttga ccctgtaata tgacagtctg ctaatattga cagaaggtgc agtttttggg
61 ttatagtcgt gattttcgct aatcaatcat attagcagga aaaaaaatga cttgtttctg
121 ttgtacttga gtcttaagaa aaagtgccca tagtttagtg acaatttcca aaggctttag
181 taccacctgt atttcaaaat gggggaccca aactcccgga agaaacaagc tctgaacaga
241 ctacgtgctc agcttagaaa gaaaaaagaa tctctagctg accagtttga cttcaagatg
301 tatattgcct ttgtattcaa ggagaagaag aaaaagtcag cactttttga agtgtctgag
361 gttataccag tcatgacaaa taattatgaa gaaaatatcc tgaaaggtgt gcgagattcc
421 agctattcct tggaaagttc cctagagctt ttacagaagg atgtggtaca gctccatgct
481 cctcgatatc agtctatgag aagggatgta attggctgta ctcaggagat ggatttcatt
541 ctttggcctc ggaatgatat tgaaaaaatc gtctgtctcc tgttttctag gtggaaagaa
601 tctgatgagc cttttaggcc tgttcaggcc aaatttgagt ttcatcatgg tgactatgaa
661 aaacagtttc tgcatgtact gagccgcaag gacaagactg gaatcgttgt caacaatcct
721 aaccagtcag tgtttctctt cattgacaga cagcacttgc agactccaaa aaacaaagct
781 acaatcttca agttatgcag catctgcctc tacctgccac aggaacagct cacccactgg
841 gcagttggca ccatagagga tcacctccgt ccttatatgc cagagtagag tactgaccag
901 caaaatggag aagatcagag aatgcagcag cagttttttt tcttgttttc ttaccacttt
961 attctttcag agtttaaaga aaatggactc atgcacagaa cactatgcat tttgaaactt
1021 gttcatcctg gattttttta aatcattttt atctcagaac ttaaacaaaa attagatgtc
1081 gtgcacggac tgtgtgaaag aagatgcttt gcatatttgc tgcactgcat cagtatctta
1141 ctaaaaatgt gaaatgaaag gactattgta cactgaaatg cttaaatgta tctgaaagca
1201 caaggtgata ctcattttta tggtcttccc atttgtgctg gtttttgcct ctttgacatc
1261 tgtcatcagt atttagaggg tgagaagtga atgtaacagg tataaataac atttttaaaa
1321 acaataactt tgctataatc acagttgttc cagagcactg tcagatacat tctaatgacc
1381 agaactggtt taaaaaaaga aaatacaacc atgggaaaga aatcttaaat gaaaaacgca
1441 tctcattgta ggcatttttg cctcatattt tactgggcca tgtttgtttc ctggtactca
1501 tgtatttttt tttttccaga tctctttccc caagttgcta ttgtaagagt attctgctgc
1561 gtgtggatgc agttatacac attaaagcag atctggagtc tgaagtagct ataaagcagc
1621 tataaaacag aaatacatgc atagctgcag aaaccatgat aggtagagga cttttctttt
1681 ggttttgttt tgttttgttt tgttttgttt ttggttttac agagaagaga tttttattac
1741 aaagaaaaaa attccagtga attgtgcaga aatgctggtt tttacaccat cctaaagaaa
1801 aactttacaa gggtgttttg gagtagaaaa aaggttataa agttggaatc ttaaattgta
1861 aaattaacca ttgagtgtca aagttctaaa agcagaactc attttgtgca atgaacataa
1921 ggaaagacta ctgtataggt tttttttttt ctccttttaa atgaagaaaa gctttgctta
1981 agggttgcat acttttattg gagtaaatct gaatgatcct actcctttgg agtaaaacta
2041 gtgcttacca gtttccaatt gtatttagct tctggttgga atttgaaaaa aaaaaaaaaa
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