LOCUS BC047776 2076 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens coiled-coil domain containing 43, mRNA (cDNA clone
MGC:54279 IMAGE:6023964), complete cds.
ACCESSION BC047776
VERSION BC047776.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2076)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2076)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC047776.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389416.
FEATURES Location/Qualifiers
source 1..2076
/db_xref="H-InvDB:HIT000053252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54279 IMAGE:6023964"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2076
/gene="CCDC43"
/db_xref="GeneID:124808"
/db_xref="HGNC:HGNC:26472"
CDS 11..694
/gene="CCDC43"
/codon_start=1
/product="CCDC43 protein"
/protein_id="AAH47776.1"
/db_xref="GeneID:124808"
/db_xref="HGNC:HGNC:26472"
/translation="MAAPSEVAAIAPGEGDGGGGGFGSWLDGRLEALGVDRAVYGAYI
LGILQEEEEEEKLDALQGILSAFLEEDSLLNICKEIVERWSETQNVVTKVKKEDEVQA
IATLIEKQAQIVVKPRMVSEEEKQRKAALLAQYADVTDEEESLTEADEKDDSGATTMN
IGSDKLLFRNTNVEDVLNARKLERDSLRDESQRKKEQDKLQRERDKLAKQERKEKEKK
RTQRGERKR"
BASE COUNT 670 a 370 c 491 g 545 t
ORIGIN
1 tgaccccaag atggcggcgc ccagcgaagt ggccgcgata gcccctggcg aaggcgatgg
61 cggaggcggc ggctttggct cctggctgga cggacggttg gaggcactgg gagtggaccg
121 agccgtttat ggagcctaca tcttgggtat cctgcaggag gaggaggaag aagagaagct
181 ggacgctctg caggggatcc tctctgcttt cctggaagaa gattccctcc ttaatatctg
241 caaggagatt gtggaacgat ggtcagaaac tcagaatgtt gtcaccaaag tgaaaaaaga
301 agatgaagta caggccattg ccaccctaat tgagaagcag gcacaaatcg tagtaaagcc
361 aaggatggtg tcagaagagg agaagcagag aaaagctgcc ctcctggccc agtatgctga
421 tgtgacagat gaagaggaat cacttactga agcagatgag aaggatgatt caggtgctac
481 cacaatgaac attggttctg acaaacttct gttccgaaac accaatgtgg aagatgtcct
541 taatgcccga aaactggagc gagactcact tcgggatgaa tcccaaagga agaaggaaca
601 ggacaagctg cagagggaga gagacaaact agccaagcag gagcgcaagg aaaaggaaaa
661 aaaaaggaca cagagagggg agcgaaagcg ataaccttgg cctactctat tctttccccc
721 catgaactta tcaaagggag aactggttgt gtatttaaga gaaatgagag tgcattgcaa
781 agtagtttcc caaggcattt cccctattgt ttacatggtc aaaaggaaaa tcaaaatcac
841 ttctaattac aaaatgtgct gttttggtgg ggtgggcaat cagattatta tagttgatga
901 ctgtaccaaa gatctggaat gggggccacc tttatatttt aatactcaag tcctgtgctc
961 cttttggcca ctttaaaaag tcttccctca ccttggataa ataggattca gaaagctaac
1021 agttttcatt ctgaaggagc agaaacataa tcaatccctc cctgagataa aatgtgggca
1081 tgcacattgc tttggagtca gtattcagct gtaagtgtag tattgtttta tggctgaaat
1141 agaaagctaa tgaagaggcc tacctggatc cagattttat gttaacatgg cagcaaaact
1201 aggaaaatgg gaagaaatta cttgcggggt gttctagatc tgattttttt tttttttttg
1261 aaagtttcag cctgtgggag gaaaagaggt atcttttaaa atagagatag ttacatattt
1321 tcctcatcta ggctgtgtca ctattgggtg caaggatatc attgttggct agattcattt
1381 tgtataatca tgtatcctct tgtgtgctgg tagagatttt aatcctgatt tttccataaa
1441 acatgagtat taagaaataa ttcctggttt ggagaaactg gagaaatcac ccttttaagg
1501 aagaaacact ggaaatttct gctaacacca agatatttaa gagtgtacat agtaggtgct
1561 caacaaattt attgaatgaa tgagtgaatg gaaaaactgg gagagtcaaa agtgagcaga
1621 agctctccat ttctacttct gtcacaaacc acattaaatt gtaaataagg cccttctcca
1681 cttgacttca ggcagcagat tgtctagaag cctaaggaca gcaatttctc tgacaagaca
1741 aagtagatat tttataccag gggttggcaa actactgccc acgggccgaa tttggcccag
1801 tctgtttttg tatggtgcaa actaaaaatg atttttacat ttttaaagag ttataaaaga
1861 aaaaaatatg tggtctgtga aatctaaaat atttactacc tggcctgttg gaggaaaggt
1921 ttgccaatct ctgttttata ccattaacta tgagattaac aaaaactttt acctttgtgc
1981 agaaggttaa aaaaaaaaaa acatggttaa ggaaaaggag acatgttacc tcttcataca
2041 ctcctataac tgtggcattg caaaaaaaaa aaaaaa
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