LOCUS BC047771 1788 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens dolichyl-phosphate (UDP-N-acetylglucosamine)
N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase),
mRNA (cDNA clone MGC:54249 IMAGE:5750385), complete cds.
ACCESSION BC047771
VERSION BC047771.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1788)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1788)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42794008
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1788
/db_xref="H-InvDB:HIT000053247"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54249 IMAGE:5750385"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1788
/gene="DPAGT1"
/gene_synonym="ALG7"
/gene_synonym="CDG-Ij"
/gene_synonym="D11S366"
/gene_synonym="DGPT"
/gene_synonym="G1PT"
/gene_synonym="GPT"
/gene_synonym="UAGT"
/gene_synonym="UGAT"
/db_xref="GeneID:1798"
/db_xref="HGNC:HGNC:2995"
/db_xref="MIM:191350"
CDS 371..1276
/gene="DPAGT1"
/gene_synonym="ALG7"
/gene_synonym="CDG-Ij"
/gene_synonym="D11S366"
/gene_synonym="DGPT"
/gene_synonym="G1PT"
/gene_synonym="GPT"
/gene_synonym="UAGT"
/gene_synonym="UGAT"
/codon_start=1
/product="DPAGT1 protein"
/protein_id="AAH47771.1"
/db_xref="GeneID:1798"
/db_xref="HGNC:HGNC:2995"
/db_xref="MIM:191350"
/translation="MIFLGFADDVLNLRWRHKLLLPTAASLPLLMVYFTNFGNTTIVV
PKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFN
LVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYFAGMTFAVVGI
LGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFKTKS
LSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHERNLTLLL
LLLQILGSAVTFSIRYQLVRLFYDV"
BASE COUNT 373 a 508 c 398 g 509 t
ORIGIN
1 ccggtgtccc gacggcggct caagtcagag ttgctgggtt ttgctcagat tggtgtggga
61 agagcctgcc tgtggggagc ggccactcca tactgctgag gcctcaggac tgctgctcag
121 cttgcccgtt acctgaagag gcggcggagc cgggcccctg accggtcacc atgtgggcct
181 tctcggaatt gcccatgccg ctgctgatca atttgatcgt ctcgctgctg ggatttgtgg
241 ccacagtcac cctcatcccg gccttccggg gccacttcat tgctgcgcgc ctctgtggtc
301 aggacctcaa caaaaccagc cgacagcaga ttttgtggcc ctgataggtg ccctccttgc
361 catctgctgc atgatcttcc tgggctttgc ggatgatgta ctgaatctgc gctggcgcca
421 taagctgctg ctacctacag ctgcctcact acctctcctc atggtctatt tcaccaactt
481 tggcaacacg accattgtgg tgcccaagcc cttccgcccg atacttggcc tgcatctgga
541 cttgggaatc ctgtactatg tctacatggg gctgctggca gtgttctgta ccaatgccat
601 caatatccta gcaggaatta acggcctaga ggctggccag tcactagtca tttctgcttc
661 catcattgtc ttcaacctgg tagagttgga aggtgattgt cgggatgatc atgtcttttc
721 cctctacttc atgataccct tttttttcac cactttggga ttgctctacc acaactggta
781 cccatcacgg gtgtttgtgg gagatacctt ctgttacttt gctggcatga cctttgccgt
841 ggtgggcatc ttgggacact tcagcaagac catgctacta ttcttcatgc cccaggtgtt
901 caacttcctc tactcactgc ctcagctcct gcatatcatc ccctgccctc gccaccgcat
961 acccagactc aatatcaaga caggcaaact ggagatgagc tattccaagt tcaagaccaa
1021 gagcctctct ttcttgggca cctttatttt aaaggtggca gagagcctcc agctggtgac
1081 agtacaccag agtgagactg aagatggtga attcactgaa tgtaacaaca tgaccctcat
1141 caacttgcta cttaaagtcc ttgggcccat acatgagaga aacctcacat tgctcctgct
1201 gctgctgcag atcctgggca gtgccgtcac cttctccatt cgatatcagc tcgttcgact
1261 cttctatgat gtctgagtcc cttgatcatt gtcctttacc tcacagtctc taggattcct
1321 gactcaggct gacctctctc tctggtccca gactgcctcc ttgcccaggc ctctctcact
1381 cttcatactc ctccagattt tgttctcagc attttccttt ctctgtgatc attggcatcc
1441 tgggcgtttc ttgccctcta ctgactactg attggatttt acctatggct ttctgcaact
1501 tgctactctc tccctctcca tcccatcttt gcagcctcat agggtgggat acagcagctt
1561 tttttgcagt tatccacact cacatttcag agtcctgact ctcaaggaac cactggtttt
1621 tgggatagaa cttgggccag ggctaggaac acaggctcca cggtgacatg tcatttgatt
1681 gtaaattaag tgctctgatt agtaagaact aagcaggggg ccacatgctc tcaatggaga
1741 caataaagtg ttgtcttttt cttaaaaaaa aaaaaaaaaa aaaaaaaa
//