LOCUS BC047767 1223 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 2, mRNA (cDNA clone MGC:54215 IMAGE:6202939),
complete cds.
ACCESSION BC047767
VERSION BC047767.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1223)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1223)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC047767.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544183.
FEATURES Location/Qualifiers
source 1..1223
/db_xref="H-InvDB:HIT000053245"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54215 IMAGE:6202939"
/tissue_type="Peripheral Nervous System, sciatic nerve"
/clone_lib="Lupski_sciatic_nerve"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1223
/gene="APOBEC2"
/gene_synonym="ARCD1"
/gene_synonym="ARP1"
/db_xref="GeneID:10930"
/db_xref="HGNC:HGNC:605"
/db_xref="MIM:604797"
CDS 85..759
/gene="APOBEC2"
/gene_synonym="ARCD1"
/gene_synonym="ARP1"
/codon_start=1
/product="apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 2"
/protein_id="AAH47767.1"
/db_xref="GeneID:10930"
/db_xref="HGNC:HGNC:605"
/db_xref="MIM:604797"
/translation="MAQKEEAAVATEAASQNGEDLENLDDPEKLKELIELPPFEIVTG
ERLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEA
FFNTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEP
EIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEK
LADILK"
BASE COUNT 333 a 307 c 314 g 269 t
ORIGIN
1 cccacgcgtc cggccgccag ggcctggccc agacctgcct gcctctctcc tctccctcag
61 tgactcctga gccacagccc ctccatggcc cagaaggaag aggctgctgt ggccactgag
121 gctgcctccc agaatgggga ggatctggag aacctggacg accctgagaa gctgaaagag
181 ctgattgagc tgccgccctt tgagattgtc acaggagaac ggctgcctgc caacttcttt
241 aaattccagt tccggaatgt ggagtacagt tccgggagga acaagacctt cctctgctat
301 gtggttgaag cacagggcaa ggggggccaa gtgcaggcat ctcggggata cctagaggat
361 gagcatgcgg ctgcccatgc agaggaagct ttcttcaaca ccatcctgcc agccttcgac
421 ccagccctgc ggtacaatgt cacctggtat gtgtcctcca gcccctgtgc agcgtgtgct
481 gaccgcatta tcaaaaccct tagcaagacc aagaacctgc gtctgctcat tctggtgggt
541 cgactcttca tgtgggagga gccggagatc caggctgctc tgaagaagct gaaggaggct
601 ggctgtaaac tgcgcatcat gaagccccag gacttcgaat atgtctggca gaattttgtg
661 gagcaagaag agggtgaatc caaggccttt cagccctggg aggacattca ggagaacttc
721 ctatactacg aggagaagtt ggcagacatc ctgaagtagg gcaactgggc tttgcctcac
781 gtattcctgc tgccaccaag agacagcaat gacatgtaca gccatctggg acatgcctgt
841 cttcctaata ccatttggag ctggacaaca tttgacacca accaatcata ctggacaagg
901 cccttagagg acttgaaata tacttctcat gctgtagttt atttaggctg tgactctctc
961 tctaatgctg ctctcgggaa ggacgaaagt gacctgcaag gagagaaatg caaccataca
1021 tgggctccag tcaactatgg gactgaaggt cctaattgct cacccaaggg ggctgcttaa
1081 cacaaacagc ctcagacccg aggtttagat ttctgaaata tgcattttat gttaagttgg
1141 gtattttttt aaaaaaagaa aaacagcaac attaataaaa gaagtggtgt gtttaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaa
//