LOCUS BC047764 2484 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens syntaxin binding protein 3, mRNA (cDNA clone MGC:54209
IMAGE:5585614), complete cds.
ACCESSION BC047764
VERSION BC047764.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2484)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2484)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: a Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005885.
FEATURES Location/Qualifiers
source 1..2484
/db_xref="H-InvDB:HIT000053243"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54209 IMAGE:5585614"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2484
/gene="STXBP3"
/gene_synonym="MUNC18-3"
/gene_synonym="MUNC18C"
/gene_synonym="PSP"
/gene_synonym="UNC-18C"
/db_xref="GeneID:6814"
/db_xref="HGNC:HGNC:11446"
/db_xref="MIM:608339"
CDS 51..1829
/gene="STXBP3"
/gene_synonym="MUNC18-3"
/gene_synonym="MUNC18C"
/gene_synonym="PSP"
/gene_synonym="UNC-18C"
/codon_start=1
/product="syntaxin binding protein 3"
/protein_id="AAH47764.1"
/db_xref="GeneID:6814"
/db_xref="HGNC:HGNC:11446"
/db_xref="MIM:608339"
/translation="MAPPVAERGLKSVVWQKIKATVFDDCKKEGEWKIMLLDEFTTKL
LASCCKMTDLLEEGITVVENIYKNREPVRQMKALYFITPTSKSVDCFLHDFASKSENK
YKAAYIYFTDFCPDNLFNKIKASCSKSIRRCKEINISFIPHESQVYTLDVPDAFYYCY
SPDPGNAKGKDAIMETMADQIVTVCATLDENPGVRYKSKPLDNASKLAQLVEKKLEDY
YKIDEKSLIKGKTHSQLLIIDRGFDPVSTVLHELTFQAMAYDLLPIENDTYKYKTDGK
EKEAILEEEDDLWVRIRHRHIAVVLEEIPKLMKEISSTKKATEGKTSLSALTQLMKKM
PHFRKQITKQVVHLNLAEDCMNKFKLNIEKLCKTEQDLALGTDAEGQKVKDSMRVLLP
VLLNKNHDNCDKIRAILLYIFSINGTTEENLDRLIQNVKIENESDMIRNWSYLGVPIV
PQSQQGKPLRKDRSAEETFQLSRWTPFIKDIMEDAIDNRLDSKEWPYCSQCPAVWNGS
GAVSARQKPRANYLEDRKNGSKLIVFVIGGITYSEVRCAYEVSQAHKSCEVIIGSTHV
LTPKKLLDDIKMLNKPKDKVSLIKDE"
BASE COUNT 872 a 381 c 498 g 733 t
ORIGIN
1 agtaggttgg gagtggaagg tggtggctgc tgctccgcag tgtcgggaag atggcgccgc
61 cggtggcaga gagggggcta aagagcgtcg tgtggcagaa gataaaagca acagtgtttg
121 atgactgcaa gaaagaaggc gaatggaaga taatgctttt agatgaattt accactaagc
181 ttttggcatc gtgttgcaaa atgacagatc ttctagaaga aggtattact gttgtagaga
241 atatttataa gaaccgtgaa cctgtcagac aaatgaaagc tctttatttc atcactccga
301 catcaaagtc tgtagattgt ttcttacatg attttgcaag taaatcggag aacaagtata
361 aagcagcata tatttacttc actgactttt gccctgataa tctctttaac aaaattaagg
421 cttcttgctc caagtcaata agaagatgta aagaaataaa tatttccttc attccacatg
481 aatctcaggt gtatactctt gatgtaccag atgcattcta ttactgttat agtccagacc
541 ctggtaatgc aaagggaaaa gatgccatta tggaaacaat ggctgaccag atagttacag
601 tgtgtgccac cttggatgaa aatcccggag taagatataa aagtaaacct ctagataatg
661 ccagtaagct tgcacagctt gttgaaaaaa agcttgaaga ctactacaag attgatgaaa
721 agagcctaat aaagggtaaa actcattcac agctcttaat aattgatcgt ggctttgatc
781 ctgtgtccac tgtcctgcat gaactgacct ttcaggcaat ggcatatgat ctactaccaa
841 ttgagaatga tacatacaaa tataaaacag atggaaaaga aaaggaggcc atccttgaag
901 aagaagatga cctctgggtt agaattcgac atcgacatat tgcggttgtg ttagaggaaa
961 ttcccaagct tatgaaagaa atttcatcaa caaagaaagc aacagaagga aagacatcac
1021 ttagtgctct tacccagctg atgaaaaaga tgccccattt ccgaaaacag attactaagc
1081 aagttgtcca tcttaactta gcagaagatt gcatgaataa gttcaagctt aatatagaaa
1141 agctctgcaa aactgaacag gacctggcac ttggaactga tgcagaagga cagaaggtga
1201 aagattccat gcgagtactc cttccagttc tactcaacaa aaatcatgat aattgtgata
1261 aaataagagc aattctactt tatatcttca gtattaatgg aactacggaa gaaaatttgg
1321 acaggttgat ccagaatgta aagatagaaa atgagagtga catgattcgt aactggagtt
1381 accttggtgt tcccattgtt ccccaatctc aacaaggcaa accgttaaga aaggatcggt
1441 ctgcagaaga aacttttcag ctctctcggt ggacaccttt tatcaaagat attatggagg
1501 atgctattga taatagatta gattcaaaag aatggccata ttgttcccag tgtccagcag
1561 tatggaatgg ttcaggagct gtaagtgctc gccagaaacc cagagctaat tatttagaag
1621 accgaaaaaa tgggtcaaag ctgattgttt ttgtaattgg agggatcaca tactctgaag
1681 tgcgttgtgc ttatgaagtt tctcaggcac ataaatcctg tgaagttatt attggttcta
1741 cacatgtttt aacacccaaa aagctgttgg atgatataaa gatgctgaat aaacccaagg
1801 ataaagtctc cttaattaaa gatgaatagc gtttcttttt ggagggttta gagattctta
1861 ctaatatgtt gaactaaaat agaaagaaaa tgttgctgtc atgtaattta aacaatgtaa
1921 atattttatg gaataatggc ttttcaaata catttcttaa ggaactgttt atgattatta
1981 ctggatttgt catttttgat aatttaaata ttgctgctgc tttgtagatg atgagaagaa
2041 atgttaaagt gctttctaaa aggaaatttt ttcacctttg gaggagaata tattagagtt
2101 gtgggtaatt tttcacagcc acctatgtac atactaatta cccattggat acttatatct
2161 aaaagtctca tgctgaagta tagtttttgg gaaagaatga ttttaaataa agagattgta
2221 aaagtaaaaa actgtaaatg tatatgtatg atagaattgt ttcctctaag tgtagttttt
2281 ctttcaacta aaattcagtt tatgtgtaaa ataattcagt cattaataga aatggagtga
2341 tttcacagtg tgtactgttt tgccacatac ttctaaagaa cacaatttta tataattttg
2401 aaatcatgta tgtttaaatt agaaaaccaa aaatcatgaa cattctaaga gaaaataaat
2461 atagaattta aaaaaaaaaa aaaa
//