LOCUS BC047741 2053 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens spinster homolog 1 (Drosophila), mRNA (cDNA clone
MGC:54108 IMAGE:5757339), complete cds.
ACCESSION BC047741
VERSION BC047741.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2053)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2053)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14042967.
FEATURES Location/Qualifiers
source 1..2053
/db_xref="H-InvDB:HIT000053232"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54108 IMAGE:5757339"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2053
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
CDS 352..1782
/gene="SPNS1"
/gene_synonym="HSpin1"
/gene_synonym="LAT"
/gene_synonym="nrs"
/gene_synonym="PP2030"
/gene_synonym="SPIN1"
/gene_synonym="SPINL"
/codon_start=1
/product="SPNS1 protein"
/protein_id="AAH47741.1"
/db_xref="GeneID:83985"
/db_xref="HGNC:HGNC:30621"
/translation="MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQ
EGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQT
VFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLV
GVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHW
ALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNLIFGLI
TCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYI
FIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDR
LRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHE
AGSTDDRIVVPQRGRSTRVPVASVLI"
BASE COUNT 313 a 682 c 635 g 423 t
ORIGIN
1 ggcggctgcc gtggtgcagc gcccgggctg agcgacagca agtgcagcgg gctcctaccc
61 cgggtgaggg gtggcctccg cgtgggatcg tgccctcttc agcccgctcc tgtccccgac
121 atcacgtgta ttccgcacgt cccctccgcg ctgtgtgtct actgagacgg ggaggcgtga
181 cagggcccgg gtcccttctc agtggtgctc tgtgcttcag ggcaagctcc ccgtctccgg
241 gcgcacttcc ctcgcctgtg ttcggtccat cctcctttct ccagcctcct cccctcgcag
301 gtgggatcgt cggtgggacc ggagcgcggg cgggcgcggc cccccgggac catggccggg
361 tccgacaccg cgcccttcct cagccaggcg gatgacccgg acgacgggcc agtgcctggc
421 accccggggt tgccagggtc cacggggaac ccgaagtccg aggagcccga ggtcccggac
481 caggaggggc tgcagcgcat caccggcctg tctcccggcc gttcggctct catagtggcg
541 gtgctgtgct acatcaatct cctgaactac atggaccgct tcaccgtggc tggcgtcctt
601 cccgacatcg agcagttctt caacatcggg gacagtagct ctgggctcat ccagaccgtg
661 ttcatctcca gttacatggt gttggcacct gtgtttggct acctgggtga caggtacaat
721 cggaagtatc tcatgtgcgg gggcattgcc ttctggtccc tggtgacact ggggtcatcc
781 ttcatccccg gagagcattt ctggctgctc ctcctgaccc ggggcctggt gggggtcggg
841 gaggccagtt attccaccat cgcgcccact ctcattgccg acctctttgt ggccgaccag
901 cggagccgga tgctcagcat cttctacttt gccattccgg tgggcagtgg tctgggctac
961 attgcaggct ccaaagtgaa ggatatggct ggagactggc actgggctct gagggtgaca
1021 ccgggtctag gagtggtggc cgttctgctg ctgttcctgg tagtgcggga gccgccaagg
1081 ggagccgtgg agcgccactc agatttgcca cccctgaacc ccacctcgtg gtgggcagat
1141 ctgagggctc tggcaagaaa tctcatcttt ggactcatca cctgcctgac cggagtcctg
1201 ggtgtgggcc tgggtgtgga gatcagccgc cggctccgcc actccaaccc ccgggctgat
1261 cccctggtct gtgccactgg cctcctgggc tctgcaccct tcctcttcct gtcccttgcc
1321 tgcgcccgtg gtagcatcgt ggccacttat attttcatct tcattggaga gaccctcctg
1381 tccatgaact gggccatcgt ggccgacatt ctgctgtacg tggtgatccc tacccgacgc
1441 tccaccgccg aggccttcca gatcgtgctg tcccacctgc tgggtgatgc tgggagcccc
1501 tacctcattg gcctgatctc tgaccgcctg cgccggaact ggcccccctc cttcttgtcc
1561 gagttccggg ctctgcagtt ctcgctcatg ctctgcgcgt ttgttggggc actgggcggc
1621 gcagccttcc tgggcaccgc catcttcatt gaggccgacc gccggcgggc acagctgcac
1681 gtgcagggcc tgctgcacga agcagggtcc acagacgacc ggattgtggt gccccagcgg
1741 ggccgctcca cccgcgtgcc cgtggccagt gtgctcatct gagaggctgc cgctcaccta
1801 cctgcacatc tgccacagct ggccctgggc ccaccccacg aagggcctgg gcctaacccc
1861 ttggcctggc ccagcttcca gagggaccct gggccgtgtg ccagctccca gacactacct
1921 gggtagctca ggggaggagg tgggggtcca ggagggggat ccctctccac aggggcagcc
1981 ccaagggctc ggtgctattt gtaacggaat aaaatttgta gccagacaaa aaaaaaaaaa
2041 aaaaaaaaaa aaa
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