LOCUS BC047712 1161 bp mRNA linear HUM 11-AUG-2008
DEFINITION Homo sapiens INO80 complex subunit E, mRNA (cDNA clone MGC:52012
IMAGE:6155713), complete cds.
ACCESSION BC047712
VERSION BC047712.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1161)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1161)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC047712.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734726.
FEATURES Location/Qualifiers
source 1..1161
/db_xref="H-InvDB:HIT000053220"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52012 IMAGE:6155713"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1161
/gene="INO80E"
/db_xref="GeneID:283899"
/db_xref="HGNC:HGNC:26905"
CDS 64..798
/gene="INO80E"
/codon_start=1
/product="INO80 complex subunit E"
/protein_id="AAH47712.1"
/db_xref="GeneID:283899"
/db_xref="HGNC:HGNC:26905"
/translation="MNGPADGEVDYKKKYRNLKRKLKFLIYEHECFQEELRKAQRKLL
KVSRDKSFLLDRLLQYENVDEDSSDSDATASSDNSETEGTPKLSDTPAPKRKRSPPLG
GAPSPSSLSLPPSTGFPLQASGVPSPYLSSLASSRYPPFPSDYLALQLPEPSPLRPKR
EKRPRLPRKLKMAVGPPDCPVGGPLTFPGRGSGAGVGTTLTPLPPPKMPPPTILSTVP
RQMFSDAGSGDDALDGDDDLVIDIPE"
BASE COUNT 250 a 384 c 332 g 195 t
ORIGIN
1 gcacggcagc cactgcttgg ggtagcggga gggcagactc tgggcgccac tcccgggccg
61 gtcatgaacg ggccggcgga cggcgaagtg gactacaaaa aaaaataccg gaatctgaag
121 cggaagctca agttcctcat ctacgagcac gagtgcttcc aggaggagct gaggaaagcg
181 caaaggaaat tactgaaggt gtcccgggac aagagtttcc tcctagaccg acttctgcag
241 tacgagaacg tggatgaaga ctcttcggac tcagatgcca ctgcatcatc agataacagc
301 gagacggagg ggacacccaa gttgtctgac acaccggccc ctaagaggaa gagaagccct
361 ccgctggggg gcgccccctc tccctccagc ctctccctgc ctccttcaac agggtttccc
421 cttcaggcct ccggggtccc ctccccatac ctgagctcgc tggcctcctc ccgctacccc
481 ccattccctt ctgactacct ggccctgcag ctgcccgagc ccagtcccct gaggcccaag
541 cgggagaaac ggccccgcct gccccggaaa ctcaagatgg cggtgggacc ccccgactgc
601 cctgtgggag ggccgctgac cttccctggc cggggttctg gggctggggt cgggacaacc
661 ctgacccccc tcccaccccc taagatgccc ccccccacga tcctgagcac ggtccctcgg
721 cagatgttca gcgatgcagg tagcggggac gatgccttgg atggagacga tgacctggtg
781 atcgacatcc cggagtgacc gtgacatcac gccatgccca ccacggcccc gcccggcgcc
841 ctccccgtgc cagcacacac gagtccagct tcctcggagg tgtttattga tgcccagctg
901 ccatgctccg gccactgaca caaccagaaa aggcgtaaac atgcacgggt gtcccccagg
961 agggtggcag gggccctgcc ttcaaacccc ggccccctcc aggggacagt tatttaaacg
1021 agtggccggg agcatctgcc acctgctggg gaggcagaga ccctgcaatg gccacctctt
1081 taaaagggca gctgtacagg gctaggtttt ttcaatgaag tttctgtatt aaaggagtgg
1141 ctctggaaaa aaaaaaaaaa a
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