LOCUS BC047704 864 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens spermatogenesis associated 3, mRNA (cDNA clone MGC:51971 IMAGE:5744971), complete cds. ACCESSION BC047704 VERSION BC047704.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 864) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 864) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: d Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31712019 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..864 /db_xref="H-InvDB:HIT000053214" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51971 IMAGE:5744971" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..864 /gene="SPATA3" /gene_synonym="TSARG1" /db_xref="GeneID:130560" /db_xref="HGNC:HGNC:17884" CDS 81..632 /gene="SPATA3" /gene_synonym="TSARG1" /codon_start=1 /product="SPATA3 protein" /protein_id="AAH47704.1" /db_xref="GeneID:130560" /db_xref="HGNC:HGNC:17884" /translation="MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQPSPES TPQHSSLETTSRQPAFQALPAPEIRRSSCCLLSPDANVKAAPQSRKAGPLTRAGPHSC SCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKSSRKPSSHRN ACPPSPRNCGCGSGGSRSCLLHH" BASE COUNT 253 a 266 c 189 g 156 t ORIGIN 1 gggcaaacgg cccctccagg agggagccgg gagattacgc agctccatgt aggtccacgt 61 ttaggttggg aggatctacc atgaagaagg tcaagaagaa aaggtcagag gccagacgcc 121 accgagactc cacctcccag catgctagct ccaattccac ctctcagcag cctagtcctg 181 aatccacacc acagcagcct agccctgaat ccacaccaca gcattccagc cttgaaacca 241 cctcccggca gccagcattc caagcccttc cagcacccga aatccgccgc tcctcttgct 301 gccttttatc tccagatgct aacgtgaagg cagcccctca atccaggaaa gcagggcctc 361 tgactcgcgc cggcccgcat tcctgctcct gtgccacttg cccctgcagc tccgcttgct 421 ggcgtcgtct ggggctatgc catagccgca tcttcgatgt ccttctgcct cgggactggc 481 agatggcgcc agggagagga ctccccaacc tgctcacctt ctacagaaaa tcttcaagaa 541 aaccctccag tcatcgtaac gcgtgtcctc caagccctcg gaactgtggc tgtggctctg 601 ggggctctag gagctgccta ctacatcact gaatccttgt gaacaagccc ctaggcccac 661 agtctggcag acctccacca gccccaggag ttgataggtg atggcgctgg gagaagatgt 721 tcagaatatc tcaaaagcca agtccagaag atccagtttc catcaaaggg acctctcttg 781 tcaccaaaat ttaaaaaaag aaaaaaaaaa cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa 841 aaaaaaaaaa aaaaaaaaaa aaaa //