LOCUS BC047704 864 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens spermatogenesis associated 3, mRNA (cDNA clone
MGC:51971 IMAGE:5744971), complete cds.
ACCESSION BC047704
VERSION BC047704.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 864)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31712019
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..864
/db_xref="H-InvDB:HIT000053214"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51971 IMAGE:5744971"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..864
/gene="SPATA3"
/gene_synonym="TSARG1"
/db_xref="GeneID:130560"
/db_xref="HGNC:HGNC:17884"
CDS 81..632
/gene="SPATA3"
/gene_synonym="TSARG1"
/codon_start=1
/product="SPATA3 protein"
/protein_id="AAH47704.1"
/db_xref="GeneID:130560"
/db_xref="HGNC:HGNC:17884"
/translation="MKKVKKKRSEARRHRDSTSQHASSNSTSQQPSPESTPQQPSPES
TPQHSSLETTSRQPAFQALPAPEIRRSSCCLLSPDANVKAAPQSRKAGPLTRAGPHSC
SCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKSSRKPSSHRN
ACPPSPRNCGCGSGGSRSCLLHH"
BASE COUNT 253 a 266 c 189 g 156 t
ORIGIN
1 gggcaaacgg cccctccagg agggagccgg gagattacgc agctccatgt aggtccacgt
61 ttaggttggg aggatctacc atgaagaagg tcaagaagaa aaggtcagag gccagacgcc
121 accgagactc cacctcccag catgctagct ccaattccac ctctcagcag cctagtcctg
181 aatccacacc acagcagcct agccctgaat ccacaccaca gcattccagc cttgaaacca
241 cctcccggca gccagcattc caagcccttc cagcacccga aatccgccgc tcctcttgct
301 gccttttatc tccagatgct aacgtgaagg cagcccctca atccaggaaa gcagggcctc
361 tgactcgcgc cggcccgcat tcctgctcct gtgccacttg cccctgcagc tccgcttgct
421 ggcgtcgtct ggggctatgc catagccgca tcttcgatgt ccttctgcct cgggactggc
481 agatggcgcc agggagagga ctccccaacc tgctcacctt ctacagaaaa tcttcaagaa
541 aaccctccag tcatcgtaac gcgtgtcctc caagccctcg gaactgtggc tgtggctctg
601 ggggctctag gagctgccta ctacatcact gaatccttgt gaacaagccc ctaggcccac
661 agtctggcag acctccacca gccccaggag ttgataggtg atggcgctgg gagaagatgt
721 tcagaatatc tcaaaagcca agtccagaag atccagtttc catcaaaggg acctctcttg
781 tcaccaaaat ttaaaaaaag aaaaaaaaaa cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaaaaaaaa aaaaaaaaaa aaaa
//