LOCUS BC047702 1958 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens zinc finger protein 169, mRNA (cDNA clone MGC:51961
IMAGE:5585128), complete cds.
ACCESSION BC047702
VERSION BC047702.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC047702.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: a Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34996534.
FEATURES Location/Qualifiers
source 1..1958
/db_xref="H-InvDB:HIT000053212"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51961 IMAGE:5585128"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1958
/gene="ZNF169"
/db_xref="GeneID:169841"
/db_xref="HGNC:HGNC:12957"
/db_xref="MIM:603404"
CDS 99..1871
/gene="ZNF169"
/codon_start=1
/product="zinc finger protein 169"
/protein_id="AAH47702.1"
/db_xref="GeneID:169841"
/db_xref="HGNC:HGNC:12957"
/db_xref="MIM:603404"
/translation="MAFRDVAVAFTQKEWKLLSSAQRTLYREVMLENYSHLVSLGIAF
SKPKLIEQLEQGDEPWREENEHLLDLCPEPRTEFQPSFPHLVAFSSSQLLRQYALSGH
PTQIFPSSSAGGDFQLEAPRCSSEKGESGETEGPDSSLRKRPSRISRTFFSPHQGDPV
EWVEGNREGGTDLRLAQRMSLGGSDTMLKGADTSESGAVIRGNYRLGLSKKSSLFSHQ
KHHVCPECGRGFCQRSDLIKHQRTHTGEKPYLCPECGRRFSQKASLSIHQRKHSGEKP
YVCRECGRHFRYTSSLTNHKRIHSGERPFVCQECGRGFRQKIALLLHQRTHLEEKPFV
CPECGRGFCQKASLLQHQSSHTGERPFLCLECGRSFRQQSLLLSHQVTHSGEKPYVCA
ECGHSFRQKVTLIRHQRTHTGEKPYLCPQCGRGFSQKVTLIGHQRTHTGEKPYLCPDC
GRGFGQKVTLIRHQRTHTGEKPYLCPKCGRAFGFKSLLTRHQRTHSEEELYVDRVCGQ
GLGQKSHLISDQRTHSGEKPCICDECGRGFGFKSALIRHQRTHSGEKPYVCRECGRGF
SQKSHLHRHRRTKSGHQLLPQEVF"
BASE COUNT 516 a 501 c 543 g 398 t
ORIGIN
1 tcgaatttgc ctctgcaact tgactctcct ctaggaagag tactccagag agcagggata
61 tgtcaccagg actcctgaca accaggaagg aggcattgat ggccttccgg gatgtggctg
121 tggccttcac ccagaaggag tggaagctat tgagttctgc tcagaggacc ctgtacaggg
181 aggtgatgct ggagaactac agccatctgg tctccctggg aattgcattt tccaaaccaa
241 aactcatcga acagctggag caaggcgacg aaccttggag agaggagaac gaacatcttc
301 tggacctttg tccagagcct agaacagaat tccagccaag ttttccccac ctggtggcct
361 tttctagctc gcagctcctc agacaatatg cgctaagtgg ccatcccaca cagatcttcc
421 caagctcatc tgcaggaggt gacttccaac tagaagctcc aagatgctct agtgaaaaag
481 gagaaagtgg agagacagaa ggccccgaca gctcattaag aaagaggcca agcagaattt
541 ctaggacatt cttcagccca catcaaggtg acccagtaga atgggtagaa gggaacagag
601 aaggaggaac agaccttcgc ctggcccaaa ggatgagtct tggggggtca gacacaatgt
661 tgaagggagc agacacttca gaatctggag cagtcatacg tggaaactat agactgggac
721 ttagcaaaaa gtcaagcctg ttcagccacc agaagcatca tgtgtgccct gaatgcggga
781 gaggcttttg ccagagatca gaccttatca agcaccagag gacacacacc ggggagaagc
841 catacctgtg tcctgagtgt gggcgtcggt ttagccagaa ggcctccctc tccatacacc
901 agaggaagca ctcgggggag aagccgtatg tgtgcaggga atgtgggcga cacttcaggt
961 atacatcctc tctcactaat cacaagagga ttcactccgg ggagaggccc tttgtatgtc
1021 aggagtgtgg gcgaggcttt cgccagaaga tagccctcct tctacaccag aggacgcact
1081 tggaggagaa gcccttcgtg tgtcctgagt gtgggagagg cttttgccag aaggcatcac
1141 tcctccagca ccagagctca cacacagggg agaggccctt cctgtgcctt gagtgtgggc
1201 gtagcttcag gcagcagtca ctcctcctta gtcaccaggt cacacactca ggagagaagc
1261 cttatgtctg tgctgagtgt gggcacagct ttcgccaaaa ggtcactctc atcaggcacc
1321 agaggacaca cacaggggag aagccttacc tgtgccccca gtgtgggcgg ggttttagcc
1381 agaaggtcac cctcattgga caccagagga cacacacagg ggagaagccc tacctgtgcc
1441 ctgattgtgg gcgtggcttt ggtcagaagg tcaccctcat cagacaccag aggacacaca
1501 caggggagaa gccttatctg tgccccaagt gtgggcgtgc atttggcttt aagtcgctcc
1561 tcacccgaca ccagaggaca cactcagagg aggagcttta cgtagacagg gtgtgtggac
1621 aaggacttgg ccagaagtca caccttatct ctgaccaaag gacacactca ggagagaagc
1681 cctgcatttg cgatgaatgt gggcgcggct ttggctttaa gtctgccctc atccgacatc
1741 agcggaccca ttctggggag aagccgtatg tctgcaggga gtgtgggcgt ggctttagcc
1801 agaagtctca cttgcataga cacaggagga ccaagtctgg tcatcagctc ctaccccaag
1861 aggtcttctg acctttcctt tccccgtgag tgtgaagctg gcagaaatca ctagtaaatg
1921 cttcagtttc ctgaaatgga atgaaaaaaa aaaaaaaa
//