LOCUS BC047681 634 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens S100 calcium binding protein A9, mRNA (cDNA clone
MGC:51841 IMAGE:6060124), complete cds.
ACCESSION BC047681
VERSION BC047681.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC047681.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9845520.
FEATURES Location/Qualifiers
source 1..634
/db_xref="H-InvDB:HIT000053198"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51841 IMAGE:6060124"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..634
/gene="S100A9"
/gene_synonym="60B8AG"
/gene_synonym="CGLB"
/gene_synonym="L1AG"
/gene_synonym="LIAG"
/gene_synonym="MAC387"
/gene_synonym="MIF"
/gene_synonym="MRP14"
/gene_synonym="NIF"
/gene_synonym="P14"
/db_xref="GeneID:6280"
/db_xref="HGNC:HGNC:10499"
/db_xref="MIM:123886"
CDS 26..370
/gene="S100A9"
/gene_synonym="60B8AG"
/gene_synonym="CGLB"
/gene_synonym="L1AG"
/gene_synonym="LIAG"
/gene_synonym="MAC387"
/gene_synonym="MIF"
/gene_synonym="MRP14"
/gene_synonym="NIF"
/gene_synonym="P14"
/codon_start=1
/product="S100 calcium binding protein A9"
/protein_id="AAH47681.1"
/db_xref="GeneID:6280"
/db_xref="HGNC:HGNC:10499"
/db_xref="MIM:123886"
/translation="MTCKMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKD
LQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPG
HHHKPGLGEGTP"
BASE COUNT 235 a 157 c 153 g 89 t
ORIGIN
1 ctcggctttg acagagtgca agacgatgac ttgcaaaatg tcgcagctgg aacgcaacat
61 agagaccatc atcaacacct tccaccaata ctctgtgaag ctggggcacc cagacaccct
121 gaaccagggg gaattcaaag agctggtgcg aaaagatctg caaaattttc tcaagaagga
181 gaataagaat gaaaaggtca tagaacacat catggaggac ctggacacaa atgcagacaa
241 gcagctgagc ttcgaggagt tcatcatgct gatggcgagg ctaacctggg cctcccacga
301 gaagatgcac gagggtgacg agggccctgg ccaccaccat aagccaggcc tcggggaggg
361 caccccctaa gaccacagtg gccaagatca cagtggccac ggccacggcc acagtcatgg
421 tggccacggc cacagccact aatcaggagg ccaggccacc ctgcctctac ccaaccaggg
481 ccccggggcc tgttatgtca aactgtcttg gctgtggggc taggggctgg ggccaaataa
541 agtctcttcc tccaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//