LOCUS BC047677 401 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens defensin, beta 1, mRNA (cDNA clone MGC:51822 IMAGE:5759899), complete cds. ACCESSION BC047677 VERSION BC047677.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 401) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 401) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: f Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50659096. FEATURES Location/Qualifiers source 1..401 /db_xref="H-InvDB:HIT000053196" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51822 IMAGE:5759899" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..401 /gene="DEFB1" /gene_synonym="BD1" /gene_synonym="DEFB-1" /gene_synonym="DEFB101" /gene_synonym="HBD1" /gene_synonym="MGC51822" /db_xref="GeneID:1672" /db_xref="HGNC:HGNC:2766" /db_xref="MIM:602056" CDS 68..274 /gene="DEFB1" /gene_synonym="BD1" /gene_synonym="DEFB-1" /gene_synonym="DEFB101" /gene_synonym="HBD1" /gene_synonym="MGC51822" /codon_start=1 /product="defensin, beta 1" /protein_id="AAH47677.1" /db_xref="GeneID:1672" /db_xref="HGNC:HGNC:2766" /db_xref="MIM:602056" /translation="MRTSYLLLFTLCLLLSEMASGGNFLTGLGHRSDHYNCVSSGGQC LYSACPIFTKIQGTCYRGKAKCCK" BASE COUNT 118 a 93 c 85 g 105 t ORIGIN 1 gctcagcctc caaagaagcc agcctctccc cagttcctga aatcctgggt gttgcctgcc 61 agtcgccatg agaacttcct accttctgct gtttactctc tgcttacttt tgtctgagat 121 ggcctcaggt ggtaactttc tcacaggcct tggccacaga tctgatcatt acaattgcgt 181 cagcagtgga gggcaatgtc tctattctgc ctgcccgatc tttaccaaaa ttcaaggcac 241 ctgttacaga gggaaggcca agtgctgcaa gtgagctggg agtgaccaga agaaatgacg 301 cagaagtgaa atgaactttt tataagcatt cttttaataa aggaaaattg cttttgaagt 361 atacctcctt tgggccaaaa aaaaaaaaaa aaaaaaaaaa a //