LOCUS BC047667 1141 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
4, mRNA (cDNA clone MGC:51760 IMAGE:6060404), complete cds.
ACCESSION BC047667
VERSION BC047667.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1141)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1141)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110940.
FEATURES Location/Qualifiers
source 1..1141
/db_xref="H-InvDB:HIT000053191"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51760 IMAGE:6060404"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1141
/gene="PSMA4"
/gene_synonym="HC9"
/gene_synonym="HsT17706"
/gene_synonym="MGC12467"
/gene_synonym="MGC24813"
/db_xref="GeneID:5685"
/db_xref="HGNC:HGNC:9533"
CDS 70..855
/gene="PSMA4"
/gene_synonym="HC9"
/gene_synonym="HsT17706"
/gene_synonym="MGC12467"
/gene_synonym="MGC24813"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 4"
/protein_id="AAH47667.1"
/db_xref="GeneID:5685"
/db_xref="HGNC:HGNC:9533"
/translation="MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVL
LAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQ
EPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWK
ATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTR
ENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK"
BASE COUNT 398 a 194 c 245 g 304 t
ORIGIN
1 gttaagggct ccgtggacat ctcaggtctt cagggtcttc catctggaac tatataaagt
61 tcagaaaaca tgtctcgaag atatgactcc aggaccacta tattttctcc agaaggtcgc
121 ttataccaag ttgaatatgc catggaagct attggacatg caggcacctg tttgggaatt
181 ttagcaaatg atggtgtttt gcttgcagca gagagacgca acatccacaa gcttcttgat
241 gaagtctttt tttctgaaaa aatttataaa ctcaatgagg acatggcttg cagtgtggca
301 ggcataactt ctgatgctaa tgttctgact aatgaactaa ggctcattgc tcaaaggtat
361 ttattacagt atcaggagcc aataccttgt gagcagttgg ttacagcgct gtgtgatatc
421 aaacaagctt atacacaatt tggaggaaaa cgtccctttg gtgtttcatt gctgtacatt
481 ggctgggata agcactatgg ctttcagctc tatcagagtg accctagtgg aaattacggg
541 ggatggaagg ccacatgcat tggaaataat agcgctgcag ctgtgtcaat gttgaaacaa
601 gactataaag aaggagaaat gaccttgaag tcagcacttg ctttagctat caaagtacta
661 aataagacca tggatgttag taaactctct gctgaaaaag tggaaattgc aacactaaca
721 agagagaatg gaaagacagt aatcagagtt ctcaaacaaa aagaagtgga gcagttgatc
781 aaaaaacacg aggaagaaga agccaaagct gagcgtgaga agaaagaaaa agaacagaaa
841 gaaaaggata aatagaatca gagattttat tactcatttg gggcaccatt tcagtgtaaa
901 agcagtccta ctcttccaca ctaggaaggc tttacttttt ttaactggtg cagtgggaaa
961 ataggacatt acatactgaa ttgggtcctt gtcatttctg tccaattgaa tactttattg
1021 taacgatgat ggttaccctt catggacgtc ttaatcttcc acacacatcc cctttttttg
1081 gaataaaatt tggaaaatgg aaatgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 a
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