LOCUS BC047614 4312 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens matrix metallopeptidase 24 (membrane-inserted), mRNA
(cDNA clone IMAGE:5768916), partial cds.
ACCESSION BC047614
VERSION BC047614.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4312)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4312)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: p Column: 10.
FEATURES Location/Qualifiers
source 1..4312
/db_xref="H-InvDB:HIT000098699"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5768916"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..4312
/gene="MMP24"
/gene_synonym="MMP25"
/gene_synonym="MT-MMP5"
/gene_synonym="MT5-MMP"
/db_xref="GeneID:10893"
/db_xref="MIM:604871"
CDS <1..1881
/gene="MMP24"
/gene_synonym="MMP25"
/gene_synonym="MT-MMP5"
/gene_synonym="MT5-MMP"
/codon_start=1
/product="MMP24 protein"
/protein_id="AAH47614.1"
/db_xref="GeneID:10893"
/db_xref="MIM:604871"
/translation="PGQAPRWSRWRVPGRLLLLLLPALCCLPGAARAAAAAAGAGNRA
AVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIP
VTGVLDQTTIEWMKKPRCGVPDHPHLSRRRRNKRYALTGQKWRQKHITYSIHNYTPKV
GELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDG
EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSD
PSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSER
KHERQPRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQ
EGYPMQIEQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGS
CLPREGIDTALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGA
FISKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQD
DVDIMVTINDVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQE
WV"
BASE COUNT 901 a 1315 c 1227 g 869 t
ORIGIN
1 ccgggccagg ccccgcgctg gagccgctgg cgggtccctg ggcggctgct gctgctgctg
61 ctgcccgcgc tctgctgcct cccgggcgcc gcgcgggcgg cggcggcggc ggcgggggca
121 gggaaccggg cagcggtggc ggtggcggtg gcgcgggcgg acgaggcgga ggcgcccttc
181 gccgggcaga actggttaaa gtcctatggc tatctgcttc cctatgactc acgggcatct
241 gcgctgcact cagcgaaggc cttgcagtcg gcagtctcca ctatgcagca gttttacggg
301 atcccggtca ccggtgtgtt ggatcagaca acgatcgagt ggatgaagaa accccgatgt
361 ggtgtccctg atcaccccca cttaagccgt aggcggagaa acaagcgcta tgccctgact
421 ggacagaagt ggaggcaaaa acacatcacc tacagcattc acaactatac cccaaaagtg
481 ggtgagctag acacgcggaa agctattcgc caggctttcg atgtgtggca gaaggtgacc
541 ccactgacct ttgaagaggt gccataccat gagatcaaaa gtgaccggaa ggaggcagac
601 atcatgatct tttttgcttc tggtttccat ggcgacagct ccccatttga tggagaaggg
661 ggattcctgg cccatgccta cttccctggc ccagggattg gaggagacac ccactttgac
721 tccgatgagc catggacgct aggaaatgcc aaccatgacg ggaacgacct cttcctggtg
781 gctgtgcatg agctgggcca cgcgctggga ctggagcact ccagcgaccc cagcgccatc
841 atggcgccct tctaccagta catggagacg cacaacttca agctgcccca ggacgatctc
901 cagggcatcc agaagatcta tggaccccca gccgagcctc tggagcccac aaggccactc
961 cctacactcc ccgtccgcag gatccactca ccatcggaga ggaaacacga gcgccagccc
1021 aggccccctc ggccgcccct cggggaccgg ccatccacac caggcaccaa acccaacatc
1081 tgtgacggca acttcaacac agtggccctc ttccggggcg agatgtttgt ctttaaggat
1141 cgctggttct ggcgtctgcg caataaccga gtgcaggagg gctaccccat gcagatcgag
1201 cagttctgga agggcctgcc tgcccgcatc gacgcagcct atgaaagggc cgatgggaga
1261 tttgtcttct tcaaaggtga caagtattgg gtgtttaagg aggtgacggt ggagcctggg
1321 tacccccaca gcctggggga gctgggcagc tgtttgcccc gtgaaggcat tgacacagct
1381 ctgcgctggg aacctgtggg caagacctac tttttcaaag gcgagcggta ctggcgctac
1441 agcgaggagc ggcgggccac ggaccctggc taccctaagc ccatcaccgt gtggaagggc
1501 atcccacagg ctccccaagg agccttcatc agcaaggaag gatattacac ctatttctac
1561 aagggccggg actactggaa gtttgacaac cagaaactga gcgtggagcc aggctacccg
1621 cgcaacatcc tgcgtgactg gatgggctgc aaccagaagg aggtggagcg gcggaaggag
1681 cggcggctgc cccaggacga cgtggacatc atggtgacca tcaacgatgt gccgggctcc
1741 gtgaacgccg tggccgtggt catcccctgc atcctgtccc tctgcatcct ggtgctggtc
1801 tacaccatct tccagttcaa gaacaagaca ggccctcagc ctgtcaccta ctataagcgg
1861 ccagtccagg aatgggtgtg agcagcccag agccctctct atccacttgg tctggccagc
1921 caggcccttc ctcaccaggg tctgaggggc agctctggcc agtgctcacc agggccagca
1981 gggccctagg ctggggtcgt acagctgaag tggtgggtgc attggcctag gctgagcgtg
2041 gggcagggaa ttatgggggc tgtgccccag ggtgggtgtc tggcacccag ctgccagcct
2101 tctgtcctgg gcaaactact ccctacttaa gggaataggc caggctccat ccggaggcag
2161 ggaccatgcc aggaggagcc cctgtggtca cggcatcctg tggtgtccat gaggtaccac
2221 agctccactc ctggctggaa cccagcaccc tctgtgggaa gccagcacta gctctcatcc
2281 cccatccggg agataccacc agtcctggtc cccttttgcc aacacctgct ggtcagatgt
2341 ccccctaccc ccaccccact gtcctccaag gctacaggac ccctgcttct gacacagtga
2401 gcaacaagcc tgggtttccc tgctggcaga cggcagatcc ctcaggaaac ctgctccact
2461 tgtcagggtc tcttcggaga cccaggattt agggtcacat gctgcaggca gggctgtggc
2521 ccagctgggt ctgacaagga cccagctgtc acatcgtgaa tatttaaatg tcctgtcact
2581 actgtcccat tttgcaaagg ctgcttgagg ctttaggtga actagaggtg actgtcttgg
2641 tgatgaggcc agcatagcgg ccctccccca ggcgacaagg accaaggtgc tgctaaggcc
2701 actctagcgc ccagacaccc cagtagctga gctctgctcc tatggctaca gagctggggc
2761 agaagctgac cccatttctg gaggaagatc cgagtttgtg accgtcctcc actcccctct
2821 attgtcactg tccccagctt tgctccagtc tgtcacttgc agcctggagc tcagcctcac
2881 cagttaggtg aggcagagat ggctgcaggg ccaacactgg cagagcctgg gagtccttcg
2941 gaaggggacc agggcgtctg aagtgctcag tgcccccact actctgaggc cgactccagc
3001 tactctgagg ccgactcaat ctctcggctg gaagcagtgt tttcccagag cttggccctt
3061 gctgacctcg ctcactgggc ccatcttccc acactgctct tagaaggaca cccctaccgg
3121 tagcagcccc aagctgaggg ggctcccttt ttgaccttca ctggcccgcc cttcactgtc
3181 tccagcagga gttcctaggg cttggcctgc cttgctccac agtacggcgg aggcagccct
3241 gcttgtcact gaggagccct agacaaggcc aatgggttca tcaatgccca ctggctctct
3301 gccaaagcca aaaaggtgtc aggcagtctc cagcgtgctg gccgggtctc ggatgccacc
3361 cctgctcact gagcctgcat gggccttgcc cccgaccctg tggtctctgg gattggggtc
3421 ggcttaccct gtagcacaga cagggactcc tgctgccctg ggagctgtct caagcaaaat
3481 ctcttgtccc agaggtgccc atgtgggtcc gctgtgtccc ctgtcatcat ccttgttttt
3541 tctcattttg gccaagggca ggctccctgg gacaggcagg gaacaactgc ggagatatta
3601 gtgattcata ggtttgtaca gtgttttata ctttgcaaag cactttatta gctcacacct
3661 gtccactcac atgaaactcg tgttaggccc tgggaggccg acggtaactc tcaccgtgcc
3721 ctcagatgaa gcacagagag gttgttactt gcccgggcca tccagtgggc tggctgggtc
3781 ttgtgtcccc atctgtggac ccctctaggg tctgagatga gatgagaagt gtctcctgta
3841 tccacctctt cctggcctcc cttcccccac ttcctggtcc ctgtccactc ctcaggttgg
3901 tgctctcact tcttgaaagc tctaggcacc cccgcctccc gccaggctcc ccattggctc
3961 ctggcaggcc agctgagaat gaacaggaga tggaggcagg cagcccaggc tgcagaggtg
4021 agggatgtgg ggccaggccc agagggctca gcctagaggc ttccaatctc agattctcct
4081 gcctgtggtc atctgtttgt ccatcacccc aggacagggc agacagaggg gcaaagcact
4141 gggggcccca gagcctagct tcccctcagc ctgggggaca tcacagcatt tcagtgtcag
4201 tcacatttta aactgatcag cctttgtata atgtttttta aatcatttct aaataaaaca
4261 gaaatacaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//