LOCUS BC047597 1426 bp mRNA linear HUM 16-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 170, member B, mRNA
(cDNA clone IMAGE:4830796), partial cds.
ACCESSION BC047597
VERSION BC047597.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1426
/db_xref="H-InvDB:HIT000098683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4830796"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1426
/gene="FAM170B"
/db_xref="GeneID:170370"
/db_xref="HGNC:HGNC:19736"
CDS <1..954
/gene="FAM170B"
/codon_start=1
/product="FAM170B protein"
/protein_id="AAH47597.1"
/db_xref="GeneID:170370"
/db_xref="HGNC:HGNC:19736"
/translation="VSTLAGASWRPSVQPQPTLTEQPEHRHPGHSFQIMKCYFTDHRG
EQSPTDGTTLSLTSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGM
RDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETE
AGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLE
CCLQELREPPDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLE
RRRAQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEKQ"
BASE COUNT 338 a 408 c 419 g 261 t
ORIGIN
1 gtgtccactc tggctggggc cagctggagg ccttcagtac agccccagcc aactctcact
61 gaacagccgg agcaccgaca ccctgggcac tcatttcaaa tcatgaaatg ctacttcaca
121 gatcacaggg gagaacagtc acccaccgat gggaccaccc tcagcttgac cagccctgag
181 tccactgagg agagtgtgga agtgttctgg ccagggacta tacagagaga agggtcgtcc
241 ccacggccgg ggcctgccat tccccgggag gagggcctct acttcgctgc cagggaccgg
301 gggatgcggg actggagcag ctccccatcc tcagagtcct ccgagtacca gtcctactcc
361 cagtaccagt cgtgctgctc ctgcatgtgc gatgaggaca atgctgctcc gcagagtgtg
421 tgtgccttct acacgcacgt gcagactgtg cggggtgtgg ctgtggcctg ggagacggag
481 gccggcttcg agccggtcac caggaagccc cgcatccatg aagcccagtt catcaagagg
541 cagaggtgga acggctcctc cttcgaaatg gcttccaaca ccgatatgcg ctgggacctg
601 gaagcctgca agagcaactg cagccccgag cccgaggaca tagacctgct ggagtgctgc
661 ctgcaggagc tgcgggagcc gccggactgg ctggtcacca ccaactacgg ggtgcgctgc
721 gtggcctgct gcagggtctt gccctccctg gacgctctgc tggagcacgc ccagcatggc
781 atccgggagg gcttcagctg tcagatcttt tttgaggaga tgctggagag aaggcgggct
841 cagggccaag cacatgacca acagctggag gaggagcaga gtccttcaga caacagcgaa
901 tgttcccggc cccagggtga ggtgctctca gcacagcagc aggagaagca gtgagccaga
961 ggggagatac ccaaccctgc cctcacctcc agggcctggg actgctcctt ccccagccag
1021 cagtatcaga gccactaggg cagggagaga ggaccagggt cagggggaag gaaaggcatg
1081 gagtgtagag caaggagggc caggagactg gaaggaaccc ccttcctgcc ctaggcacag
1141 catctccacc agagtccatt tcaaaaccca aacgagaggg ctttgagtgt ttctgatggc
1201 aggcacaaca tctgaaaccc acaaacgcat ggccagaggg atttctattt ttgccggtgg
1261 atcaggcagg tccacacttg ctaagtatat gtgggtcaca ggacagccaa ctgcaaatta
1321 ctctccagcc ctattttttt cactattaca aatctgtcat atgccctagt tctatgtctt
1381 atgttattgg gattaaactt gaataacaca aaaaaaaaaa aaaaaa
//