LOCUS BC047584 1913 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2R 2, mRNA (cDNA clone
MGC:48413 IMAGE:4827644), complete cds.
ACCESSION BC047584
VERSION BC047584.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1913)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1913)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: i Column: 5.
FEATURES Location/Qualifiers
source 1..1913
/db_xref="H-InvDB:HIT000053176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48413 IMAGE:4827644"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1913
/gene="UBE2R2"
/gene_synonym="CDC34B"
/gene_synonym="FLJ20419"
/gene_synonym="MGC10481"
/gene_synonym="UBC3B"
/db_xref="GeneID:54926"
/db_xref="HGNC:HGNC:19907"
CDS 431..1147
/gene="UBE2R2"
/gene_synonym="CDC34B"
/gene_synonym="FLJ20419"
/gene_synonym="MGC10481"
/gene_synonym="UBC3B"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2R 2"
/protein_id="AAH47584.1"
/db_xref="GeneID:54926"
/db_xref="HGNC:HGNC:19907"
/translation="MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVA
IFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVD
DPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKE
YAEIIRKQVSATKAEAEKDGVKVPTTLAEYCIKTKVPSNDNSSDLLYDDLYDDDIDDE
DEEEEDADCYDDDDSGNEES"
BASE COUNT 480 a 510 c 495 g 428 t
ORIGIN
1 gaagagaacg agagggcgag cgagcgcggc gttcccgggc cggcccggcc ccctcccttc
61 accatcgccg gccctccgcc gccttcctcc gcttccacct cctctccccc cccccaagtt
121 gaggccccct ccgggggggg gaggcccggg accgggaccc gtagcgaatt ctcctaactc
181 cctcgacctc tcctctcgcc cggcccgagt gtgaggagaa gggcccggcc cggcctgcgt
241 cgtgtgtgag gaggaccccg ggcgggccca cgggccgtgt ggggcctggt ccggcccgcc
301 gggtgtgtga agaccggggc ccggtgctgc ccggccggag ggcgagcgga ggggaggggc
361 ctggtccggc ccggccggtg cgtgaggact ggggcccggg cccggcgccg ccgccgccgc
421 cgccgccgcg atggcccagc agcagatgac cagctcgcag aaggccctga tgctcgagct
481 gaaatccctg caggaggaac cggtggaggg cttccggatc accctggtgg acgagtccga
541 cctctacaac tgggaggtgg ccatcttcgg accccccaac accctctacg aaggcggcta
601 cttcaaggcg catattaaat ttcctattga ctacccctat tcaccaccta ccttcagatt
661 cttgaccaaa atgtggcacc ccaacattta tgagaatgga gatgtatgca tttcgattct
721 tcatccgcct gtagatgacc cacagagtgg agaactgcct tctgaaaggt ggaatcctac
781 tcagaatgtg aggactatcc tattaagtgt aatctcactg cttaatgagc ccaacacctt
841 ctccccagcc aatgtcgatg cttcagttat gttcaggaaa tggagagaca gtaaaggaaa
901 agacaaagaa tatgctgaaa ttattaggaa acaagtttca gccactaagg ccgaagcaga
961 aaaggatgga gtgaaggtcc ccacaaccct ggcggaatac tgcatcaaaa ctaaagtgcc
1021 ttccaatgac aacagctcag atttgcttta cgacgacttg tatgatgacg acattgatga
1081 tgaagatgag gaggaggaag atgccgactg ttatgatgat gatgattctg ggaatgagga
1141 gtcgtgacgt gctccttcag tgcccctgta ctgccctgcc atctcaggcc aaagggaggg
1201 gagcaagtgg ggacctggcc atggcccctc agcaaaaacc tattcacagc gggtggggaa
1261 acacacagct cctgctgact ccccttatgg atctcagttt gctccttttt atggaccttt
1321 aatggagaga gagtaaccct ccacagaatg tctgaattct tgcattcttt acccttccat
1381 cactatattg attctttttt taaaaaacat gaacccaaac tcccgcctca cttcgtctct
1441 acagaatgtt cacagcaaaa cacgtttggt ctgtttttag attcttgaag aattcaatag
1501 tctttcaaga tgtttaatgt gtttaaagct gggaacctgt tgggagttca caagtgctgc
1561 atatactggg tagcaaaaga aaatggaaaa aaacccacaa aacaaacttt aaaaaaaaaa
1621 aaaaagcaaa tttgccaagg tttagctgct catttacatt agtgtgtgtg cattcgttca
1681 gccccatggt ggtgaattct gtttctttcc tttcctaagg ctgggacatg gtgggcatca
1741 gggactttgt gctaagcctg atgaaatgtg ctccttcaat ctccatgaaa ccatcgtaac
1801 atggaggcct cagctgctct gaggagagaa atcagacttt gttttttgaa atcgattggg
1861 atcgaaagcc tgaaataaat attcatactt tccatagaaa aaaaaaaaaa aaa
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