LOCUS BC047583 3102 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens SPARC related modular calcium binding 2, mRNA (cDNA
clone MGC:48409 IMAGE:4826950), complete cds.
ACCESSION BC047583
VERSION BC047583.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3102)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3102)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: h Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308276.
FEATURES Location/Qualifiers
source 1..3102
/db_xref="H-InvDB:HIT000053175"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48409 IMAGE:4826950"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3102
/gene="SMOC2"
/gene_synonym="bA270C4A.1"
/gene_synonym="bA37D8.1"
/gene_synonym="dJ421D16.1"
/gene_synonym="MST117"
/gene_synonym="MSTP117"
/gene_synonym="MSTP140"
/gene_synonym="SMAP2"
/db_xref="GeneID:64094"
/db_xref="MIM:607223"
CDS 193..1533
/gene="SMOC2"
/gene_synonym="bA270C4A.1"
/gene_synonym="bA37D8.1"
/gene_synonym="dJ421D16.1"
/gene_synonym="MST117"
/gene_synonym="MSTP117"
/gene_synonym="MSTP140"
/gene_synonym="SMAP2"
/codon_start=1
/product="SMOC2 protein"
/protein_id="AAH47583.1"
/db_xref="GeneID:64094"
/db_xref="MIM:607223"
/translation="MLLPQLCWLPLLAGLLPPVPAQKFSALTFLRVDQDKDKDCSLDC
AGSPQKPLCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDVSRCVAERKYTQEQAR
KEFQQVFIPECNDDGTYSQVQCHSYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEK
LPQREGTGKTDDAAAPALETQPQGDEEDIASRYPTLWTEQVKSRQNKTNKNSVSSCDQ
EHQSALEEAKQPKNDNVVIPECAHGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRY
EQPKCDNTARAHPAKARDLYKGRQLQGCPGAKKHEFLTSVLDALSTDMVHAASDPSSS
SGRLSEPDPSHTLEERVVHWYFKLLDKNSSGDIGKKEIKPFKRFLRKKSKPKKCVKKF
VEYCDVNNDKSISVQELMGCLGVAKEDGKADTKKRHTPRGHVESTSNRQPRKQG"
BASE COUNT 798 a 803 c 793 g 708 t
ORIGIN
1 aaaagaacgc ggaggacctc tgggtgcctg caggggagct gctccagccg ggccgccggg
61 agcggtgggg agagcatcgc ggagccgccc ctccacgcgc ccgcccagcc gcgctcgccc
121 actgggctct cccggctgca gtgccagggc gcagggcgcg gccgatctcc cgctcccgcc
181 acctccgcca ccatgctgct cccccagctc tgctggctgc cgctgctcgc tgggctgctc
241 ccgccggtgc ccgcgcagaa gttctcggcg ctcacgtttt tgagagtgga tcaagataaa
301 gacaaggatt gtagcttgga ctgtgcgggt tcgccccaga aacctctctg cgcatctgac
361 ggaaggacct tcctttcccg ttgtgaattt caacgtgcca agtgcaaaga tccccagcta
421 gagattgcat atcgaggaaa ctgcaaagac gtgtccaggt gtgtggccga aaggaagtat
481 acccaggagc aagcccggaa ggagtttcag caagtgttca ttcctgagtg caatgacgac
541 ggcacctaca gtcaggtcca gtgtcacagc tacacgggat actgctggtg cgtcacgccc
601 aacgggaggc ccatcagcgg cactgccgtg gcccacaaga cgccccggtg cccgggttcc
661 gtaaatgaaa agttacccca acgcgaaggc acaggaaaaa cagatgatgc cgcagctcca
721 gcgttggaga ctcagcctca aggagatgaa gaagatattg catcacgtta ccctaccctt
781 tggactgaac aggttaaaag tcggcagaac aaaaccaata agaattcagt gtcatcctgt
841 gaccaagagc accagtctgc cctggaggaa gccaagcagc ccaagaacga caatgtggtg
901 atccctgagt gtgcgcacgg cggcctctac aagccagtgc agtgccaccc ctccacgggg
961 tactgctggt gcgtcctggt ggacacgggg cgccccattc ccggcacatc cacaaggtac
1021 gagcagccga aatgtgacaa cacggccagg gcccacccag ccaaagcccg ggacctgtac
1081 aagggccgcc agctacaagg ttgtccgggt gccaaaaagc atgagtttct gaccagcgtt
1141 ctggacgcgc tgtccacgga catggtccac gccgcctccg acccctcctc ctcgtcaggc
1201 aggctctcag aacccgaccc cagccatacc ctagaggagc gggtggtgca ctggtacttc
1261 aaactactgg ataaaaactc cagtggagac atcggcaaaa aggaaatcaa acccttcaag
1321 aggttccttc gcaaaaaatc aaagcccaaa aaatgtgtga agaagtttgt tgaatactgt
1381 gacgtgaata atgacaaatc catctccgta caagaactga tgggctgcct gggcgtggcg
1441 aaagaggacg gcaaagcgga caccaagaaa cgccacaccc ccagaggtca tgttgaaagt
1501 acgtctaata gacagccaag gaaacaagga taaatggctc ataccccgaa ggcagttcct
1561 agacacatgg gaaatttccc tcaccaaaga gcaattaaga aaacaaaaac agaaacacat
1621 agtatttgca ctttgtactt taaatgtaaa ttcactttgt agaaatgagc tatttaaaca
1681 gactgtttta atctgtgaaa atggagagct ggcttcagaa aattaatcac atacaatgta
1741 tgtgtcctct tttgaccttg gaaatctgta tgtggtggag aagtatttga atgcatttag
1801 gcttaatttc ttcgccttcc acatgttaac agtagagctc tatgcactcc ggctgcaatc
1861 gtatggcttt ctctaacccc tgcagtcact tccagatgcc tgtgcttaca gcattgtgga
1921 atcatgttgg aagctccaca tgtccatgga agtttgtgat gtacggccga ccctacaggc
1981 agttaacatg catgggctgg tttgtttctt gggattttct gttagtttgt cttgttttgc
2041 tttccagaga tcttgctcat acaatgaatc acgcaaccac taaagctatc cagttaagtg
2101 caggtagttc ccctggagga aataatattt tcaaactgtc gttggtgtga tactttggct
2161 caaaggatct ttgcttttcc attttaagct tctgttttga gttttgccct ggggcttgaa
2221 tgagtcccag agagtcgttc ggatggtggg aggctgccta ggaggcagta aatccagtca
2281 cagtgcctgg gaggggccca tccttccaaa atgtaaatcc agtcgcggtg tgaccgagct
2341 ggctaacagg cttgtctgcc tggttttcct cctacacgtg gacattattc tcctgatcct
2401 cctacctggt ccaccccagg gctaccggaa ggtaaaatct tcacctgaac caattatgag
2461 cagtctcctt actgaaggta cagccggata cgtggtgccc ccggggctgg tgttggcagc
2521 cggggggagg tgcctgaggg tccccacggt tcctttctgc ttttctgaat gcatcaaggg
2581 tacgagaact tgccaatggg aaattcatcc gagtggcact ggcagagaag gataggagtg
2641 gaatgcccac acagtgacca acagaactgg tctgcgtgca taaccagctg ccaccctcag
2701 gcctgggccc cagagctcag ggcacccagt gtcttaagga accatttgga ggacagtctg
2761 agagcaggaa cttcaagctg tgattctatc tcggctcaga cttttggttg gaaaaagatc
2821 ttcatggccc caaatcccct gagacatgcc ttgtagaatg attttgtgat gttgtgatgc
2881 ttgtggagca tcgcgtaagg cttcttgctt atttaaactg tgcaaggtaa aaatcaagcc
2941 tttggagcca cagaaccagc tcaagtacat gccaatgttg tttaagaaac agttatgatc
3001 ctaaactttt tggataatct tttatatttc tgacctttga atttaatcat tgttcttaga
3061 ttaaaataaa atatgctatt gaaactaaaa aaaaaaaaaa aa
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