LOCUS BC047578 3001 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens SEC14 and spectrin domains 1, mRNA (cDNA clone
MGC:48388 IMAGE:4815542), complete cds.
ACCESSION BC047578
VERSION BC047578.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59709431.
FEATURES Location/Qualifiers
source 1..3001
/db_xref="H-InvDB:HIT000053173"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48388 IMAGE:4815542"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3001
/gene="SESTD1"
/gene_synonym="DKFZp434O0515"
/gene_synonym="SOLO"
/db_xref="GeneID:91404"
/db_xref="HGNC:HGNC:18379"
CDS 300..2390
/gene="SESTD1"
/gene_synonym="DKFZp434O0515"
/gene_synonym="SOLO"
/codon_start=1
/product="SEC14 and spectrin domains 1"
/protein_id="AAH47578.1"
/db_xref="GeneID:91404"
/db_xref="HGNC:HGNC:18379"
/translation="MEASVILPILKKKLAFLSGGKDRRSGLILTIPLCLEQTNMDELS
VTLDFLLSIPSEKCKARGFTVIVDGRKSQWNVVKTVVVMLQNVVPAEVSLVCVVKPDE
FWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYDHMDWLNKR
LVFEKFTKESTSLLDELALINNGSDKGNQQEKERSVDLNFLPSVDPETVLQTGHELLS
ELQQRRFNGSDGGVSWSPMDDELLAQPQVMKLLDSLREQYTRYQEVCRQRSKRTQLEE
IQQKVMQVVNWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVYVELN
QQIAALLNAGDEEDLVELKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQDLSQ
QLDGLLGMLCVDVAPADGASIQQTLKLLEEKLKSVDVGLQGLREKGQGLLDQISNQAS
WAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMVDVRRLKMLQMVQLFKCEEDAAQ
AVEWLSELLDALLKTHIRLGDDAQETKVLLEKHRKFVDVAQSTYDYGRQLLQATVVLC
QSLRCTSRSSGDTLPRLNRVWKQFTIASEERVHRLEMAIAFHSNAEKILQDCPEEPEA
INDEEQFDEIEAVGKSLLDRLTVPVVYPDGTEQYFGSPSDMASTAENIRDRMKLVNLK
RQQLRHPEMVTTES"
BASE COUNT 902 a 605 c 712 g 782 t
ORIGIN
1 cgcgtggacg cggctcgggc cgcgggtgcc gagaggtcgc cgggccaccc gcacccccgc
61 tccccgcctg acgcacggag gggccgggac gcgatttgcc gcgagtgact ggagccgcag
121 ccgtcgccgc tgccgccgcc gccgcccggg cccgctccgc ccccagcccg ccttcctccc
181 gccgcgccct ccgcctccgc ccgcacctcg ctagcgttcc cctgtcttcc ccaacgcccc
241 ggagccgccg gccgctagcg tcagcgccag ccagaattaa ggaagttcac tggagtaaaa
301 tggaggcctc agtaatatta cccattctga agaaaaaact agccttcctt tcaggaggaa
361 aggacagacg gagtggcctc attttgacaa ttccattatg cctcgaacag acaaatatgg
421 atgagctgag tgtcacctta gacttcctac tcagcattcc aagtgagaag tgtaaggcta
481 gaggatttac cgtgattgtg gatggcagaa aatcacagtg gaatgtggtg aaaacagtag
541 tcgtaatgct acagaatgtt gttccagctg aggtgtccct tgtttgtgtg gtaaagccag
601 atgaattctg ggataagaaa gtaacgcatt tttgtttttg gaaggagaag gatagacttg
661 gctttgaggt tattttagtg tccgccaaca aattgactcg ttatatagaa ccatgccaat
721 taacagaaga ttttggtggg agtctcacct atgatcacat ggactggtta aataagaggc
781 tggtttttga gaagtttaca aaggaatcta catcattatt agatgaactt gctttgatta
841 acaatggaag tgataaagga aatcagcaag agaaagaaag gtctgtggat ttaaactttc
901 ttccatcggt tgatcctgaa acagttcttc agacagggca tgaattgttg tccgaattac
961 agcagcgtcg atttaatggc tcagacggag gggtttcatg gtctcctatg gatgatgaac
1021 ttcttgcaca gccacaggtt atgaaattat tagattcact ccgagagcaa tatacccgct
1081 accaggaagt ttgtaggcaa cgtagcaagc gcacacagtt agaagagatt caacagaagg
1141 taatgcaggt ggtgaactgg ctagaagggc ctggatcaga acaactaaga gcccagtggg
1201 gcattggaga ctccattagg gcctcccagg ccctacagca gaaacacgaa gagattgaga
1261 gccagcacag tgaatggttt gcagtgtatg tggaacttaa tcagcaaatt gcagcactct
1321 tgaatgctgg cgatgaggaa gatcttgtgg aactaaagtc actgcagcaa caacttagtg
1381 atgtttgtta tcgacaggcc agtcagctgg aatttaggca aaatctctta caagcagctc
1441 ttgaatttca tggtgttgcc caagatttgt ctcagcagtt ggatggctta ttagggatgt
1501 tgtgcgtaga tgtagcacca gctgatggag catcgattca gcaaacttta aaactgcttg
1561 aagagaagct gaaaagtgtt gatgtgggat tgcaaggttt gcgtgaaaaa ggtcaaggtc
1621 tcctggatca gatctccaat caggcatcct gggcctatgg aaaggatgta accattgaaa
1681 ataaagaaaa tgtggaccac atacaaggag tgatggaaga tatgcagctt agaaaacaaa
1741 gatgtgaaga catggtagat gtgcgaaggt taaagatgct tcagatggtg cagttgttta
1801 aatgtgaaga agatgctgcc caggcagtag aatggctaag tgaacttctg gatgctctgc
1861 ttaagactca catcagattg ggcgatgatg ctcaagaaac gaaagttttg ctggaaaagc
1921 atagaaaatt tgttgatgtt gcacagagca cttatgacta tggcaggcag ttgctacagg
1981 ccacagttgt gttatgccaa tctttgcgct gcacttctcg gtcatctggg gatacacttc
2041 ctcgactgaa cagagtatgg aaacaattta caatagcatc tgaagagaga gtacatagat
2101 tggaaatggc tattgcattt cactcaaatg ctgaaaagat tttgcaggac tgtccagaag
2161 agcctgaagc tattaatgat gaggagcaat ttgatgaaat tgaagcagtt gggaaatcac
2221 ttttggatag attaactgtt ccagtagttt atcctgatgg aaccgaacaa tattttggga
2281 gtccaagtga catggcttct actgcagaaa acatcagaga caggatgaaa ctagttaatc
2341 tcaaaaggca gcagctgaga catcctgaaa tggtgaccac agagagctaa tagctaccag
2401 ctacctacag atttgcagtt cataatcccg catgttgtca acatactaca gcattagcca
2461 ccacacctta agatgcattt cacagccaaa ataagtctca tttcttttca tgacacattt
2521 ctctttacat gttaacacct tgctactacc aaggcataat tacttaacat gcttcgaggc
2581 tgtagattcc aagtatctta aaagaaggaa ctataaacat tgcactgaaa acttgcttta
2641 aagctttacc tgacctgtca gtttgtagac aaacaactga taataagctt tgaatggtgc
2701 taataagagt aggaattctc tctattaaaa agaaaaaaaa aagttgccat tcctccacag
2761 gtgatttagt aaatttagac agtagttaaa ctcttgttag tagacagtgg tgtcctcaaa
2821 attttacttt gtaattcttc agaattgatt atttttattg tgtcaataca gagaaagcct
2881 ttcagatctt tgatatatca tagtcattaa aagacctttt cctatttgta ttgataatgt
2941 attaaaagtt gtttgtgctt aataaaagac ttctttaaac atctcaaaaa aaaaaaaaaa
3001 a
//