LOCUS BC047569 1816 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens membrane-associated ring finger (C3HC4) 3, mRNA (cDNA
clone MGC:48332 IMAGE:4819831), complete cds.
ACCESSION BC047569
VERSION BC047569.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1816)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1816)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341961.
FEATURES Location/Qualifiers
source 1..1816
/db_xref="H-InvDB:HIT000053170"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48332 IMAGE:4819831"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1816
/gene="MARCH3"
/gene_synonym="MARCH-III"
/gene_synonym="MGC48332"
/gene_synonym="RNF173"
/db_xref="GeneID:115123"
/db_xref="HGNC:HGNC:28728"
CDS 266..1027
/gene="MARCH3"
/gene_synonym="MARCH-III"
/gene_synonym="MGC48332"
/gene_synonym="RNF173"
/codon_start=1
/product="membrane-associated ring finger (C3HC4) 3"
/protein_id="AAH47569.1"
/db_xref="GeneID:115123"
/db_xref="HGNC:HGNC:28728"
/translation="MTTSRCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQV
SAKDGQLLSTVVRTLATQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLE
HWLSSSNTSYCELCHFRFAVERKPRPLVEWLRNPGPQHEKRTLFGDMVCFLFITPLAT
ISGWLCLRGAVDHLHFSSRLEAVGLIALTVALFTIYLFWTLVSFRYHCRLYNEWRRTN
QRVILLIPKSVNVPSNQPSLLGLHSVKRNSKETVV"
BASE COUNT 450 a 424 c 453 g 489 t
ORIGIN
1 agttgttgag caggtccgtg aattgtcagc gcgctgtggg cgactgtgtg gccgcggcgg
61 ccgccaggct tgccgcactc cccctgaggt gcccgccgga accaatgtgc cctggtccac
121 tgggccgtga gcagccaccg actgggggca acttggcact tagaaccgca gcagggacgt
181 cggtttgcta tcgggactcg gcgaggacga tggaaatcct gtatgaatgt ggaagccatt
241 agcagagtaa ttgctgtctg ttaccatgac aaccagccgc tgcagtcacc tgcccgaagt
301 cctgccagac tgcaccagct cagctgcacc cgtggtgaag acggtggagg attgtggcag
361 cctagtgaat gggcagccgc agtatgtcat gcaagtttca gccaaggacg ggcagctgct
421 gtcaacagta gtgcggactc ttgccaccca gagccccttc aatgaccggc cgatgtgcag
481 gatctgccac gagggcagca gccaagagga cttgctctct ccatgtgaat gtacagggac
541 cttggggaca attcatcgga gctgcctgga gcactggctg tcatcctcaa acaccagcta
601 ctgtgaactc tgccacttca ggtttgcagt cgagcgcaaa cccaggccgt tagtggagtg
661 gctgagaaac cctggccccc agcatgagaa gcggactctg tttggcgaca tggtgtgctt
721 cttgtttata actcccctgg ccaccatctc gggctggctg tgcctgcggg gcgccgtgga
781 ccacctgcac tttagtagtc ggctggaagc cgtcggactg attgcactca ctgtcgcact
841 cttcactatt tacctctttt ggacactagt gtcatttagg taccactgtc gattgtacaa
901 cgagtggcgt cggaccaatc agagggtgat tctcctcatt ccaaagtctg tcaatgtacc
961 ttctaaccag ccgtccttgc tgggcctcca ttcggtcaag aggaactcaa aggagacagt
1021 tgtttgatgt ttgtatggtt ggttggttgt ttgattcatt gtttggggtt tggaagtgtc
1081 tgcactgggg tcatgcactg agcgaccccc aagcccttcc ttaagcctgt gggtctaaga
1141 acatccagag catattagca catcactcca agcaacaacc tccgccagaa gaaagcaaat
1201 gctgttttac ttcaaatgat ggatgctgca atcatatgat atttgctaag ctgccaaaca
1261 tgtttattta gcagatactg tatggaattt tctgaacacc tctttaacgt atgaggaagg
1321 ttgtcctgct acggatgcaa ttcaattctt ccttttttta ttactatttc aaacacacac
1381 acatatatat atatattaaa cttagatgat aatcaaaatc aaaaagtcaa cgtaaaaact
1441 ggtttcttgg tttggttggg tcttatttga gttagtttgt ttctcagttt ctcgtatgga
1501 ttctttgggg tactttggta gcctgagtgg tctttttcat ctctttcgcg tccattactc
1561 aaggagacag cataacagat gcagaacaag tcatatttga agaatgtttt gtactaaact
1621 tcatttaatt attcagtttt taaagggaaa aagggcgtga gctcacacag tgagctgttt
1681 atttaaatat cattaaggag aaaaaaaaat atggtgagaa gctcgctcct ttcaacttgt
1741 ttggtactga cagctgatag aagctatttt ctaataataa acatccagtg tgtgaaagac
1801 aaaaaaaaaa aaaaaa
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