LOCUS BC047565 1983 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens solute carrier family 22 (organic cation/carnitine
transporter), member 16, mRNA (cDNA clone MGC:48287 IMAGE:4838011),
complete cds.
ACCESSION BC047565
VERSION BC047565.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1983)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1983)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542326.
FEATURES Location/Qualifiers
source 1..1983
/db_xref="H-InvDB:HIT000053167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48287 IMAGE:4838011"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1983
/gene="SLC22A16"
/gene_synonym="CT2"
/gene_synonym="dJ261K5.1"
/gene_synonym="FLIPT2"
/gene_synonym="OCT6"
/gene_synonym="OKB1"
/db_xref="GeneID:85413"
/db_xref="HGNC:HGNC:20302"
/db_xref="MIM:608276"
CDS 68..1801
/gene="SLC22A16"
/gene_synonym="CT2"
/gene_synonym="dJ261K5.1"
/gene_synonym="FLIPT2"
/gene_synonym="OCT6"
/gene_synonym="OKB1"
/codon_start=1
/product="solute carrier family 22 (organic
cation/carnitine transporter), member 16"
/protein_id="AAH47565.1"
/db_xref="GeneID:85413"
/db_xref="HGNC:HGNC:20302"
/db_xref="MIM:608276"
/translation="MGSRHFEGIYDHVGHFGRFQRVLYFICAFQNISCGIHYLASVFM
GVTPHHVCRPPGNVSQVVFHNHSNWSLEDTGALLSSGQKDYVTVQLQNGEIWELSRCS
RNKRENTSSLGYEYTGSKKEFPCVDGYIYDQNTWKSTAVTQWNLVCDRKWLAMLIQPL
FMFGVLLGSVTFGYFSDRLGRRVVLWATSSSMFLFGIAAAFAVDYYTFMAARFFLAMV
ASGYLVVGFVYVMEFIGMKSRTWASVHLHSFFAVGTLLVALTGYLVRTWWLYQMILST
VTVPFILCCWVLPETPFWLLSEGRYEEAQKIVDIMAKWNRASSCKLSELLSLDLQGPV
SNSPTEVQKHNLSYLFYNWSITKRTLTVWLIWFTGSLGFYSFSLNSVNLGGNEYLNLF
LLGVVEIPAYTFVCIAMDKVGRRTVLAYSLFCSALACGVVMVIPQKHYILGVVTAMVG
KFAIGAAFGLIYLYTAELYPTIVRSLAVGSGSMVCRLASILAPFSVDLSSIWIFIPQL
FVGTMALLSGVLTLKLPETLGKRLATTWEEAAKLESENESKSSKLLLTTNNSGLEKTE
AITPRDSGLGE"
BASE COUNT 481 a 434 c 504 g 564 t
ORIGIN
1 ggggcggggc gcgctacccg cagcccccgg agctcggcta actcggcgcc cagtgcacgg
61 ccgcaccatg gggtcccgcc acttcgaggg gatttatgac cacgtggggc acttcggcag
121 attccagaga gtcctctatt tcatatgtgc cttccagaac atctcttgtg gtattcacta
181 cttggcttct gtgttcatgg gagtcacccc tcatcatgtc tgcaggcccc caggcaatgt
241 gagtcaggtt gttttccata atcactctaa ttggagtttg gaggacaccg gggccctgtt
301 gtcttcaggc cagaaagatt atgttacggt gcagttgcag aatggtgaga tctgggagct
361 ctcaaggtgt agcaggaata agagggagaa cacatcgagt ttgggctatg aatacactgg
421 cagtaagaaa gagtttcctt gtgtggatgg ctacatatat gaccagaaca catggaaaag
481 cactgcggtg acccagtgga acctggtctg tgaccgaaaa tggcttgcaa tgctgatcca
541 gcccctattt atgtttggag tcctactggg atcggtgact tttggctact tttctgacag
601 gctaggacgc cgggtggtct tgtgggccac aagcagtagc atgtttttgt ttggaatagc
661 agcggcgttt gcagttgatt attacacctt catggctgct cgcttttttc ttgccatggt
721 tgcaagtggc tatcttgtgg tggggtttgt ctatgtgatg gaattcattg gcatgaagtc
781 tcggacatgg gcgtctgtcc atttgcattc cttttttgca gttggaaccc tgctggtggc
841 tttgacagga tacttggtca ggacctggtg gctttaccag atgatcctct ccacagtgac
901 tgtccccttt atcctgtgct gttgggtgct cccagagaca cctttttggc ttctctcaga
961 gggacgatat gaagaagcac aaaaaatagt tgacatcatg gccaagtgga acagggcaag
1021 ctcctgtaaa ctgtcagaac ttttatcact ggacctacaa ggtcctgtta gtaatagccc
1081 cactgaagtt cagaagcaca acctatcata tctgttttat aactggagca ttacgaaaag
1141 gacacttacc gtttggctaa tctggttcac tggaagtttg ggattctact cgttttcctt
1201 gaattctgtt aacttaggag gcaatgaata cttaaacctc ttcctcctgg gtgtagtgga
1261 aattcccgcc tacaccttcg tgtgcatcgc catggacaag gtcgggagga gaacagtcct
1321 ggcctactct cttttctgca gtgcactggc ctgtggtgtc gttatggtga tcccccagaa
1381 acattatatt ttgggtgtgg tgacagctat ggttggaaaa tttgccatcg gggcagcatt
1441 tggcctcatt tatctttata cagctgagct gtatccaacc attgtaagat cgctggctgt
1501 gggaagcggc agcatggtgt gtcgcctggc cagcatcctg gcgccgttct ctgtggacct
1561 cagcagcatt tggatcttca taccacagtt gtttgttggg actatggccc tcctgagtgg
1621 agtgttaaca ctaaagcttc cagaaaccct tgggaaacgg ctagcaacta cttgggagga
1681 ggctgcaaaa ctggagtcag agaatgaaag caagtcaagc aaattacttc tcacaactaa
1741 taatagtggg ctggaaaaaa cggaagcgat tacccccagg gattctggtc ttggtgaata
1801 aatgtgccat gcctgctgtc tagcacctga aatattattt accctaatgc ctttgtatta
1861 gaggaatctt attctcatct cccatatgtt gtttgtatgt ctttttaata aattttgtaa
1921 gaaaatttta aagcaaatat gttataaaag aaataaaaac taagatgaaa aaaaaaaaaa
1981 aaa
//