LOCUS BC047510 4003 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens progestin and adipoQ receptor family member III, mRNA
(cDNA clone MGC:48508 IMAGE:5297045), complete cds.
ACCESSION BC047510
VERSION BC047510.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4003)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 18
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..4003
/db_xref="H-InvDB:HIT000053152"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48508 IMAGE:5297045"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4003
/gene="PAQR3"
/gene_synonym="RKTG"
/db_xref="GeneID:152559"
/db_xref="HGNC:HGNC:30130"
CDS 180..989
/gene="PAQR3"
/gene_synonym="RKTG"
/codon_start=1
/product="PAQR3 protein"
/protein_id="AAH47510.1"
/db_xref="GeneID:152559"
/db_xref="HGNC:HGNC:30130"
/translation="MHQKLLKSAHYIELGSYQYWPVLVPRGIRLYTYEQIPGSLKDNP
YITDGYRAYLPSRLCIKSLFILSNETVNIWSHLLGFFLFFTLGIYDMTSVLPSASASR
EDFVICSICLFCFQVCMLCSVGYHLFSCHRSEKTCRRWMALDYAGISIGILGCYVSGV
FYAFYCNNYWRQVYLITVLAMILAVFFAQIHPNYLTQQWQRLRSIIFCSVSGYGVIPT
LHWVWLNGGIGAPIVQDFAPRVIVMYMIALLAFLFYISKVPERYFPESLPR"
BASE COUNT 1188 a 732 c 780 g 1303 t
ORIGIN
1 gctggcggca gtggccggtg tgagcgcaga gccgggccct gggcagcagc ggcagcgcgg
61 taggacctcg cgcagcgtcc gcgggctccg gggcgggggc gccagcggcg aagccccctc
121 cccggggagg cgggacctgg gggagctccc gagccgggga gcggcggcgg ccgggaacga
181 tgcatcagaa gctgctgaag agcgcgcatt acatcgagct gggcagctac cagtactggc
241 cggtcctggt gccccgtggc atccgcctgt acacctacga gcagatcccc gggtccctca
301 aggacaaccc gtacatcacc gacggctacc gggcctacct gccgtccagg ctgtgtatca
361 aaagtttgtt tattttatct aatgagacag taaacatctg gagtcatttg ctgggtttct
421 ttctcttctt caccctggga atatatgaca tgacatctgt gttaccttca gcaagtgcgt
481 ccagagaaga ttttgtaatt tgttctattt gtcttttctg cttccaggtc tgtatgcttt
541 gctctgtggg ctatcatctt ttttcctgcc atcggtcaga aaaaacatgt cgaagatgga
601 tggcattaga ttatgcagga atttctattg gaatactggg ctgctatgtc tcaggagtat
661 tttacgcatt ttattgtaat aactactggc gtcaggtgta cttgatcaca gtgcttgcta
721 tgatcctggc agtgttcttt gcgcagattc atcccaatta cctcacgcag caatggcaaa
781 ggctccgttc tatcatcttt tgttctgttt cgggatatgg agtgattcct actcttcact
841 gggtttggct caatggagga attggtgctc ctattgtaca ggactttgca ccccgtgtaa
901 ttgtgatgta tatgattgct cttcttgctt tcctattcta catttccaaa gtcccagagc
961 ggtactttcc agaatcactt ccacggtgaa tcagagaagg gattgtacca ctcgtcacgt
1021 gtgttgggaa agaagaaagg gtgagaaacc ctggcctaaa caatccatcc cacagatcct
1081 caggcattcc tttgtgtact tggtttttca ccactgagct ttaaataaga atggaaatac
1141 aagggaaaac ctgcgttgta aacatgagga tttgggaaca gatctaggac atgccactga
1201 attgaagacc acccatcttc caggcagggc cagaattaca gaaaacaatt ctggacaact
1261 aaactacctc ggatcaagcc accaaatatg gcatatcctt gcagtagtga tgttatattg
1321 gtggcatcag tcaacagtgt atgtcatgca gtacagacat agcaagcctt gtcctgacta
1381 tgtttcacat ttgtgaatta ggtatggcca cctggtgaat tcagttgtta agcaatatat
1441 aatggggaat tgtatacccc actatttcta agattcccat tagttttccc tttttccttt
1501 ttaatatgag taatgcttta taaaaatggg aaaaaaagta tacttaagga tctgtagtaa
1561 taactgcttt acaaaatcct taaaactact aatttgctgc ttgtacagaa agtgaaaatt
1621 agttggcaat cataagaaac atctgaataa caacgatgaa tgggaaacta gtgttgaaat
1681 aggattcatt ttacttagca ccagcttaat ttccttagga agggctcatc tccattagaa
1741 aatggagtca tcttatgtgc ttaattattt tcagttaatt gtcaagttta agtgcctaat
1801 caaggcaagt gttgtttcag cctatgctta atgcaagcta ggatagtgat tttaaataat
1861 cactaaaatc actagattta aataatcact aaaatgattt gtgagaaact ggcacttcag
1921 atattatatc ctttagctat aggttcttct ctccctaaga acattagata ttttagtttt
1981 ccagaacaaa agctttaaac ttctgcagta agttgagaga agggttgaga agaggaaaag
2041 aacttctcat tttctatcag ataagaatca cattagaaac taagtacaag attagacaac
2101 aaattatgtg gtcaaataat atagtcatta gccacctaaa cattttaatt ccagatatta
2161 tttaattcca tataataact gaattcttgt gagtggatta caggtttttg atcccaaaat
2221 tccagagctt tcaactctct gaatttgtag tcctgaatat cccagtggtg ggggttccca
2281 gcattgtggg tgctacttgc aaggccatag aatctagatg gccctgtctt gaccctgaaa
2341 tgaaccttaa gccttagaac aaagtcatgc agatgcccca tttgataata atcttattca
2401 cctgtgctct ggtcctcggt ttctgcatgt gttagcattg cattgataac tcagaatctt
2461 gataaacact taatatttgg gcctgaagca ttaaactttc tttttattgt atatacttaa
2521 aaaatagaac tcactgccct atcatacatt gtagccctct tattctttgg tctttcatat
2581 gcattagtta aatcccttaa agtagacatt cataaaaact tacattgttt attggagtat
2641 aaaatattac ccaagtttct tcatgagttg acatgagctg ttttaaatac tggtgtattt
2701 tcagaacagt aaaattactg aatatcagaa aaaatgttaa ttgatgatga agcttattcc
2761 caaaatgcct tttgtgcata tgatacttgg aaagtcacta atgtgcctca gttaatacat
2821 cagtaaaatg ttgtgtttct tttccagtgt agtgtttttg gaatataaat tccccatgct
2881 agtatagtat ctcagcaaag agaatttccc cccaggaggc tcagtaaagg aataccgtgt
2941 cttacccatc gttatgatgg aaggctgctt tgaaaatggc tgttttacct tataaggtta
3001 aaattttgat ccatatgtta agtgatagaa gattttggtg caacagtagt aggatatatt
3061 tctcctagaa catcccttat tggcttacat gattttattg ccttttaata gatattttgt
3121 cattttggcc aaacaaaaga cactgagtag ttacacttaa gttaaaaatg aggggaaaat
3181 cattatttta ggtgtggagc catttttatt ataaaacttt ctcaataaaa aaacattgaa
3241 tcatttcaat ttttgcagtc cctgtattag tatatgaata catacttgcc atttgaatta
3301 ataacatgaa aagagtatac tgtgttttta aatccgtgtt tctttgaatt taaagggtgt
3361 acaggtcttt ctgtagggaa aattattcca tgtaaacatt tcaactctgt atgaaaatgt
3421 taaatattgt aagaaagtta tcctctcatt ttttcactgc tatgatatat ttattataaa
3481 atagggaatg aatgaatgaa tatggattgc tgttaactag aaacacttct gtatgtcagt
3541 cagcatttaa tgaccaccta ctgtgtgcac agcactactg gtaaaatttt gaagacattg
3601 ttaacattaa aaaatatttt aaagttgtct acaaatctga gccttgtaat gatgtatatt
3661 taagttattt ttgtttttat agattaaagt aagattatac tatccagttt tattactaaa
3721 aaagactggt tttaatttta ccaatgtgtg aactataaaa gctttttgcc tacagatttt
3781 acattttaaa gttatctatg gctgttttaa attgtctagc aatttatatg gttgtggtta
3841 actcatttaa gaaacaatta tctttctata ttaagccatt ttcaaatagc aagacagtgc
3901 ttgtcttttt ttgttattac actaactgca attcagtaag ctgcatgaca aaatatgtat
3961 tatgtaaata aactgggttt actaaataaa aaaaaaaaaa aaa
//