LOCUS BC047509 3056 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 66, mRNA (cDNA clone
MGC:48472 IMAGE:5276957), complete cds.
ACCESSION BC047509
VERSION BC047509.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3056)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3056)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60302909.
FEATURES Location/Qualifiers
source 1..3056
/db_xref="H-InvDB:HIT000259096"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48472 IMAGE:5276957"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3056
/gene="CCDC66"
/db_xref="GeneID:285331"
/db_xref="HGNC:HGNC:27709"
CDS 388..2883
/gene="CCDC66"
/codon_start=1
/product="coiled-coil domain containing 66"
/protein_id="AAH47509.1"
/db_xref="GeneID:285331"
/db_xref="HGNC:HGNC:27709"
/translation="MQKTRNTVNTSLVGKQKPHKKHITAENMKSSLVCLTQDQLQQIL
MTVNQGNRSLSLTENGKEAKSQYSLYLNSISNQPKDENIMGLFKKTEMVSSVPAENKS
VLNEHQETSKQCEQKIAIENEWKPADIFSTLGERECDRSSLEAKKAQWRKELDEQVAL
KKKEKEVSEKWNDPWKKSESDKIIWEKHQILDQSRETVLLEHPFSAVKQELQRKWIEE
LNKQIEDDRQRKIEEKIIYSKGEEHDRWAMHFDSLKSYPGSQSQLFSRSTHKQPEYFC
VSPDTQELADVSSVCTPTTGSQVEPSEEEHIAKPIKDVVMANSKKTNFLRSMTALLDP
AQIEERDRQRQKQLEHQKAITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQK
QYEEDILKQKQKEEIMTLKTNELFQTMQRAQELAQRLKQEQRIRELAQKGHDTSRLIK
NLGVDTIQMEYNASNISNSRHDSDEISGKMNTYMNSTTSKKDTGVQTDDLNIGIFTNA
ESHCGSLMERDITNCSSPEISAELIGQFSTKKNKQELTQDKGASLEKENNRCNDQCNQ
FTRIEKQTKHMKKYPKRPDWNINKPPKRYIPASEKYPKQLQKQREEKKVRRQMELLHL
VEKNNPGHLSQNRGISPEIFHSSHQETESKLRWHLVKKEEEPLNIHSFSKERSPSSPV
PVVKNRTQQTQNTLHLPLKNSSYERENLISGSNQTELSSGISESSHFIPYVRTNEIYY
LDPDAPLSGPSTQDPQYQNSQDCGQKRQLFDSDCVRDPLLNPNMVKNRDRQQAILKGL
SELRQGLLQKQKELESSLLPLAENQEESFGSSF"
BASE COUNT 1205 a 533 c 611 g 707 t
ORIGIN
1 aaccgacgta cacaaggggc ttgagcgttc tgtggagaga gtgcgagaga tggtttaaag
61 cttgaaactg aattactgga tggaaaaacc aagctaatat tgtctccata tgaacataaa
121 tcaaaaattt ctgtgaagat gggaaataag gccaagattg caaaatgtcc tttaagaaca
181 aaaactgggc acattctaaa atcaacacaa gatacttgta ttgggagtga aaaacttttg
241 caaaagaagc cagttggttc agaaacatca caggcaaaag gtgaaaaaaa tggaatgact
301 ttttcatcca ctaaggattt atgtaaacaa tgtatagata aagactgtct tcatatccag
361 aaagagattt cacctgcaac tcctaatatg cagaagacta gaaacaccgt aaatacatct
421 ctagtaggta aacagaagcc tcacaaaaaa cacatcacag ctgaaaacat gaagagcagt
481 ttggtgtgtc taacacaaga ccaactacaa cagattttga tgactgtaaa ccaaggaaat
541 agatctcttt ccctgactga gaatggaaag gaggcaaaaa gtcaatatag tctatattta
601 aacagtattt ctaatcagcc aaaggatgag aacattatgg gattattcaa aaaaactgaa
661 atggtttcat ctgtcccagc tgaaaataaa tctgtcttaa atgaacatca ggagacatct
721 aaacagtgtg agcaaaaaat tgccatagag aatgaatgga aaccagctga tatattcagt
781 actctggggg aaagggaatg tgatagaagt tcgttggaag caaaaaaagc ccagtggagg
841 aaagagctag atgaacaggt tgctttaaag aagaaagaaa aagaagtttc tgaaaaatgg
901 aatgatcctt ggaaaaaatc tgaaagtgat aaaataatat gggaaaaaca tcaaattctt
961 gaccaatcta gggaaacagt actgctggag caccctttca gtgctgtgaa acaagaactg
1021 cagagaaaat ggattgaaga gttgaataag caaatagaag atgaccgtca aagaaaaata
1081 gaggaaaaaa ttatatattc aaagggtgag gaacatgaca gatgggcaat gcactttgat
1141 tcattaaaga gttatcctgg ttctcaatct cagctgttct ctcggtcaac acacaaacaa
1201 cctgagtact tctgtgtctc tcctgacact caggagctgg ctgatgtcag cagtgtttgt
1261 acacctacaa ccggaagcca ggttgaacct tcagaggagg agcatatagc aaaacctatt
1321 aaggatgtgg ttatggcaaa cagtaagaaa acaaactttc tccgttctat gactgctctc
1381 ttggacccag ctcagattga ggaacgagac agacaacgac aaaaacaatt agagcatcag
1441 aaagccatca ctgcccaggt agaagagaag cgcaggaaga aacaactgga ggaagagcaa
1501 agaaagaagg aagaacaaga agaggagctt cgcttagcac aggaacgtga agagatgcag
1561 aaacagtatg aagaagacat acttaagcaa aaacaaaagg aagaaatcat gactctcaag
1621 acaaatgagc tattccagac aatgcagcga gcacaggaac tggcacagag actaaaacaa
1681 gaacaaagaa tccgagaatt ggcgcaaaag ggacatgaca cttctagact gattaaaaat
1741 cttggtgttg atacaataca aatggaatat aatgcatcta acatttcaaa ttcaagacat
1801 gattctgatg aaatcagtgg taaaatgaat acatatatga attctacgac ttctaagaag
1861 gatactggtg tgcaaacaga tgacttaaat ataggaatat tcaccaatgc agaatcacat
1921 tgtggatcat taatggagag ggacatcaca aattgttcat ctcctgagat ttcggcagaa
1981 cttattggac agtttagcac caagaaaaac aagcaagaac taactcagga taaaggagcc
2041 agcttagaaa aagaaaacaa tcggtgtaat gaccagtgta atcagttcac aagaatagag
2101 aaacaaacaa aacacatgaa gaaatatcct aaaaggcctg attggaatat aaataagcca
2161 cctaaaaggt atattccagc atcagaaaag taccctaaac agcttcaaaa gcagagagaa
2221 gaaaaaaaag taaggaggca gatggaattg cttcatttgg tagaaaaaaa taatcctggg
2281 cacctctctc aaaacagagg catttcacca gaaatttttc attcatctca tcaagaaacg
2341 gagtcaaagt tgaggtggca tctagtcaaa aaggaagaag agcctctgaa tattcattca
2401 ttcagcaagg aaaggtctcc atcatcacca gttccagtag tgaaaaacag aacccaacaa
2461 actcaaaata cattacattt accactaaaa aacagtagct atgagagaga gaatttgatc
2521 tcaggaagta atcaaacaga attatcatct gggatttctg aatcatccca ttttattccg
2581 tatgttcgaa caaatgagat ctattacctt gatcccgatg caccattgtc tgggccttca
2641 acccaggacc ctcagtacca aaattcacaa gactgtggcc aaaaacgaca gctatttgat
2701 tctgactgtg tcagggatcc acttcttaat cctaacatgg tgaaaaatag ggatcgacag
2761 caagcaatcc ttaagggact ttcagaactg agacagggcc ttctccagaa gcaaaaggag
2821 ttggaaagta gtctcctgcc tttagctgaa aatcaagaag agagttttgg ttcttcattt
2881 taaatgtaga aaatcaaatc cttcacattt gatttgtgtc ttccaaatta taaaatgtgc
2941 tcactggctc aactgtattt ttcaaatagc ctagatttac ttattttttt aaatgctcat
3001 taaaaacttg tatactatgt agtaaaaaaa aaaaaaaaag aaaaaaaaaa aaaaaa
//