LOCUS BC047480 3286 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens deleted in azoospermia 4, mRNA (cDNA clone MGC:50968
IMAGE:5297459), complete cds.
ACCESSION BC047480
VERSION BC047480.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3286)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3286)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54292111.
FEATURES Location/Qualifiers
source 1..3286
/db_xref="H-InvDB:HIT000053143_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50968 IMAGE:5297459"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3286
/gene="DAZ4"
/gene_synonym="DAZ"
/gene_synonym="DAZ1"
/gene_synonym="pDP1680"
/gene_synonym="pDP1681"
/db_xref="GeneID:57135"
/db_xref="HGNC:HGNC:15966"
CDS 213..1385
/gene="DAZ4"
/gene_synonym="DAZ"
/gene_synonym="DAZ1"
/gene_synonym="pDP1680"
/gene_synonym="pDP1681"
/codon_start=1
/product="deleted in azoospermia 4"
/protein_id="AAH47480.1"
/db_xref="GeneID:57135"
/db_xref="HGNC:HGNC:15966"
/translation="MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFV
GGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIH
FHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNP
VTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPA
YPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTA
GYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQ
AFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGEQRRNLWTEAYKWWYLVCLIQRRD"
BASE COUNT 979 a 652 c 590 g 1065 t
ORIGIN
1 agtcagtcgg cctgcgctcc tcagcctggc ggttctacct ccgagggttc gcccgccctt
61 ggttttcctt acaccttagc ctttggctcc tttgaccact cgaagcccca cagcgtgttc
121 cagcggactt caccagcaga cccagaagtg gtgggtgaaa cactgcctct gttcctcctt
181 gagcctgtcg ggagctgctg cctgccacca ccatgtctgc tgcaaatcct gagactccaa
241 actcaaccat ctccagagag gccagcaccc agtcttcatc agctgcagct agccaaggct
301 gggtgttacc agaaggcaaa atcgtgccaa acactgtttt tgttggtgga attgatgcta
361 ggatggatga aactgagatt ggaagctgct ttggtagata cggttcagtg aaagaagtga
421 agataatcac gaatcgaact ggtgtgtcca aaggctatgg atttgtttcg tttgttaatg
481 acgtggatgt ccagaagata gtaggatcac agatacattt ccatggtaaa aagctgaagc
541 tgggccctgc aatcaggaaa caaaagttat gtgctcgtca tgtgcagcca cgtcctttgg
601 tagttaatcc tcctcctcca ccacagtttc agaacgtctg gcggaatcca aacactgaaa
661 cctacctgca gccccaaatc acgccgaatc ctgtaactca gcacgttcag gcttactctg
721 cttatccaca ttcaccaggt caggtcatca ctggatgtca gttgcttgta tataattatc
781 aggaatatcc tacttatccc gattcagcat ttcaggtcac cactggatat cagttgcctg
841 tatataatta tcagccattt cctgcttatc caagatcacc atttcaggtc actgctggat
901 atcagttgcc tgtatataat tatcaggcat ttcctgctta tccaaattca ccatttcaag
961 tcgccactgg atatcagttc cctgtataca attatcagcc atttcctgct tatccaagtt
1021 caccatttca ggtcactgct ggatatcagt tgcctgtata taattatcag gcatttcctg
1081 cttatccaaa ttcaccattt caagtcgcca ctggatatca gttccctgta tacaattatc
1141 aggcatttcc tgcttatcca aattcaccag ttcaggtcac cactggatat cagttgcctg
1201 tatacaatta tcaggcattt cctgcttatc caaattcagc agttcaggtc accactggat
1261 atcagttcca tgtatacaat taccagatgc caccgcagtg ccctgttggg gagcaaagga
1321 gaaatctgtg gaccgaagca tacaaatggt ggtatcttgt ctgtttaatc cagagaagag
1381 actgataaat tccgttgtta ctcaagatga ctgcttcaag ggtaaaagag tgcatcactt
1441 tagaagaagt ttggcagtat ttaaatctgt tggatcctct cagctatcta gtttcatggg
1501 aagttgctgg ttttgaatat taagctaaaa gttttccact attacagaaa ttctgaattt
1561 tggtaaatca cactgaaact ttctgtataa cttgtattat tagactctct agttttatct
1621 taacactgaa actgttcttc attagatgtt tatttagaac ctggttctgt gtttaatata
1681 tagtttaaag taacaaataa tcgagactga aagaatgtta agatttatct gcaaggattt
1741 ttaaaaaatt gaaacttgca ttttaagtgt ttaaaagcaa atactgactt tcaaaaaagt
1801 ttttaaaacc tgatttgaaa gctaacaatt ttgatagtct gaacacaagc atttcacttc
1861 tccaagaagt acctgtgaac agtacaatat ttcagtattg agctttgcat ttatgattta
1921 tctagaaatt tacctcaaaa gcagaatttt taaaactgca tttttaatca gtggaactca
1981 atgtatagtt agctttattg aagtcttatc caaacccagt aaaacagatt ctaagcaaac
2041 agtccaatca gtgagtcata atgtttattc aaagtatttt atcttttatc tagaatccac
2101 atatgtatgt ccaatttgat tgggatagta gttaggataa ctaaaattct gggcctaatt
2161 ttttaaagaa tccaagacaa actaaacttt actgggtata taaccttctc aatgagttac
2221 cattcttttt tataaaaaaa attgttcctt gaaatgctaa acttaatggc tgtatgtgaa
2281 atttgcaaaa tactggtatt aaagaacgct gcagcttttt tatgtcactc aaaggttaat
2341 cggagtatct gaaaggaatt gtttttataa aaacattgaa gtattagtta cttgctataa
2401 atagattttt atttttgttt tttagcctgt tatatttcct tctgtaaaat aaaatatgtc
2461 cagaagaggc atgttgtttc tagattaggt agtgtcctca ttttatattg tgaccacaca
2521 gctagagcac cagagccctt ttgctatact cacagtcttg ttttcccagc ctcttttact
2581 agtctttcag gaggtttgct cttagaactg gtgatgtaaa gaatggaagt agctgtatga
2641 gcagttcaaa ggccaagccg tggaatggta gcaatgggat ataatacctt tctaagggaa
2701 acatttgtat cagtatcatt tgatctgcca tggacatgtg tttaaagtgg ctttctggcc
2761 cttctttcaa tggcttcttc cctaaaacgt ggagactcta agttaatgtc gttactatgg
2821 gccatattac taatgcccac tggggtctat gatttctcaa aattttcatt cggaatccga
2881 aggatacagt ctttaaactt tagaattccc aagaaggctt tattacacct cagaaattga
2941 aagcaccatg actttgtcca ttaaaaaatt atccatagtt tttttagtgc ttttaacatt
3001 ccgacataca tcattctgtg attaaatctc cagatttctg taaatgatac ctacattcta
3061 aagagttaat tctaattatt ccgatatgac cttaaggaaa agtaaaggaa taaatttttg
3121 tctttgttga agtatttaat agagtaaggt aaagaagata ttaagtccct ttcaaaatgg
3181 aaaattaatt ctaaactgag aaaaatgttc ctactaccta ttgctgatac tgtctttgca
3241 taaatgaata aaaataaact ttttttcttc aaaaaaaaaa aaaaaa
//