LOCUS BC047456 2717 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens carbonic anhydrase X, mRNA (cDNA clone MGC:50971
IMAGE:5276935), complete cds.
ACCESSION BC047456
VERSION BC047456.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2717)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48976057.
FEATURES Location/Qualifiers
source 1..2717
/db_xref="H-InvDB:HIT000098597"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:50971 IMAGE:5276935"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2717
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/db_xref="GeneID:56934"
/db_xref="HGNC:HGNC:1369"
/db_xref="MIM:604642"
CDS 900..1886
/gene="CA10"
/gene_synonym="CA-RPX"
/gene_synonym="CARPX"
/gene_synonym="HUCEP-15"
/codon_start=1
/product="carbonic anhydrase X"
/protein_id="AAH47456.1"
/db_xref="GeneID:56934"
/db_xref="HGNC:HGNC:1369"
/db_xref="MIM:604642"
/translation="MEIVWEVLFLLQANFIVCISAQQNSPKIHEGWWAYKEVVQGSFV
PVPSFWGLVNSAWNLCSVGKRQSPVNIETSHMIFDPFLTPLRINTGGRKVSGTMYNTG
RHVSLRLDKEHLVNISGGPMTYSHRLEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIH
YNHELYTNVTEAAKSPNGLVVVSIFIKVSDSSNPFLNRMLNRDTITRITYKNDAYLLQ
GLNIEELYPETSSFITYDGSMTIPPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPS
QIFLSMSDNFRPVQPLNNRCIRTNINFSLQGKDCPNNRAQKLQYRVNEWLLK"
BASE COUNT 709 a 691 c 682 g 635 t
ORIGIN
1 agttgcgggc gatggaagcc aggcaactgg gggttctggg gagttcagga aaatagcaga
61 ggagcaggaa gggcgcgcgc gacctggaga gtctgtgtgc ccccaccgcg ccccagtccc
121 cggggcccag cccttcccct cggcgccctg gacgcactgc cggaacccgg ctgagaggct
181 gcaggctgcg cgcggacctg gggagcaggg agggtcggcg gaggctgccg gcggctggcg
241 gtttcgggca ataatccctg cctctctttc tctgtgtgtc tgctgtgtct gctccttccc
301 cgccccccgg aagcaggaga agaactgccc cggagcgcag cagccaccct ccgaccatgc
361 cccggtgagg ggggcggact tcgagggcaa cttgccgcgg actgcctggg cttagccagc
421 gagctacgcg ctcccgggag cccggaattg cacggcgcag cccggcgggg ggctatcgtc
481 tatgtcttct tggggcgcca gacgaatcgg ggtctcgttt ttgctggaag agcccagtgt
541 tggtggcttc aggtggctgc tgccgccgcc gccgccgccg ccgctgctag tgcggtttcc
601 gccgctggtg cgaagagaag agacacgcga gcggggagac ctccaaggca gcgaggcatc
661 ggacatgtgt cagcacatct ggggcgcaca tccgtcgagc ccgaggggag atttgccgga
721 acaattcaaa ctgcgatatt gatcttgggg gtgactgtcc ctggccggct gtcgggtggg
781 agtgcgagtg tgcactcgct cggaagtgtg tgcgagtgtg tatgtgtgtg tgccgtgtcg
841 ggctcccccc ttccccccgt tttcccgtcg agtgatgcac ttggaatgag aatcagagga
901 tggaaatagt ctgggaggtg ctttttcttc ttcaagccaa tttcatcgtc tgcatatcag
961 ctcaacagaa ttcaccaaaa atccatgaag gctggtgggc atacaaggag gtggtccagg
1021 gaagctttgt tccagttcct tctttctggg gattggtgaa ctcagcttgg aatctttgct
1081 ctgtggggaa acggcagtcg ccagtcaaca tagagaccag tcacatgatc ttcgacccct
1141 ttctgacacc tcttcgcatc aacacggggg gcaggaaggt cagtgggacc atgtacaaca
1201 ctggaagaca cgtatccctt cgcctggaca aggagcactt ggtcaacata tctggagggc
1261 ccatgacata cagccaccgg ctggaggaga tccgactaca ctttgggagt gaggacagcc
1321 aagggtcgga gcacctcctc aatggacagg ccttctctgg ggaggtgcag ctcatccact
1381 ataaccatga gctatatacg aatgtcacag aagctgcaaa gagtccaaat ggattggtgg
1441 tagtttctat atttataaaa gtttctgatt catcaaaccc atttcttaat cgaatgctca
1501 acagagatac tatcacaaga ataacatata aaaatgatgc atatttacta caggggctta
1561 atatagagga actatatcca gagacctcta gtttcatcac ttacgatggg tcgatgacta
1621 tcccaccctg ctatgagaca gcaagttgga tcataatgaa caaacctgtc tatataacca
1681 ggatgcagat gcattccttg cgcctgctca gccagaacca gccatctcag atctttctga
1741 gcatgagtga caacttcagg cctgtccagc cactcaacaa ccgctgcatc cgcaccaata
1801 tcaacttcag tttacagggg aaggactgtc caaacaaccg agcccagaag cttcagtata
1861 gagtaaatga atggctcctc aagtagggaa caaagccaag aagaatccca cctcagtgaa
1921 atgctacaac tgtgaattga cgtaacctag aatgtccccc ttcttgcttc tctctccttc
1981 tttcccccaa gcctcattca ttcttgggat tggccctttc ttcatgaaaa gtgtctgcaa
2041 aaccatggca gaggaataca tctctcacac atactcacaa acacacacac aagcacttgc
2101 acatacatac aaacacatgc aaacatacct acacacacac acactcttac aacctccatc
2161 atgggaagtc aagtttcaga aacaaaagtc tcattcataa gaggtcttag aagaaaataa
2221 ccagttaacc tgatttcaat tttgataccg ttttcctgaa ctaataaatc tacccaatga
2281 gacttttcag cctttgtaca tacaaaattc ttccaaaaga gagaggagaa aatacagctc
2341 tgatggcatc aaacggactt tgcatcaagt aatttcagat agtgtcctag gatcctttga
2401 gggtgctggt agcaggtgag caggacaaag ttgaccaagg acacttattt ctagattatg
2461 attcttctgt ttactcaaca atttacaaag aaaaaaagga cagacattga agagctacac
2521 attgtatata tatcaccaca gactataagg aaatggaatt atttccctct ttgtcacata
2581 tctgtagtag gatttgccaa gatcagaaat gatccatttg ctgtttcttg ttttccaaag
2641 gtcatacatt gtgtttggtt attgttacca gctcaataaa tgtgtttaac gagttaattt
2701 caaaaaaaaa aaaaaaa
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