LOCUS BC047442 1645 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens cation channel, sperm associated 2 pseudogene 1, mRNA
(cDNA clone IMAGE:5294645).
ACCESSION BC047442
VERSION BC047442.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: h Column: 8.
FEATURES Location/Qualifiers
source 1..1645
/db_xref="H-InvDB:HIT000098588"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5294645"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 419 a 343 c 456 g 427 t
ORIGIN
1 gggggggccg aggcggcgag tgtctgggcg agcgtggctg ggcccggtcc tgggctgggg
61 gcaggggcta gggccgggtc ccggggtgag ccgaaacctg ggggtcgggc ggggcgggaa
121 atgggcgcag tgaggctggg agccggccct gagctcgtcc tgcgtagggg tagccgggct
181 cagggggcgc ctgagctgga ggtggaagcg tgaagtcagg actgagtggg cgaagagaac
241 ctgggctgag cagacatggc cgcttaccaa caagaagggc agatgcagct tccccgagct
301 gatgccattc gttcacgtct catcgatact ttctctctca tcgagcattt gcaaggcttg
361 agccaagctg tgctgcgaca cactatcagg agttacttga tccttcccgc cagaagaaac
421 ttatgttggg agatcaacac cagctagtgg gcgtctctat aaagcctcaa cgtatagaac
481 agatttcaca tgcccagagg ctgttgagca ggcttcatgt gcgctgcagt cagaggccac
541 ctctttcttt gtgggccgga tgggtccttg agtaattgct ggaatccaca aataccaaac
601 tatggccatt gaagctgacc ttggaggggg cagcttggtt tatcttgctt attttcatcc
661 tggagatcct tcttaagtgg ctatccaact tttctgtttt ctggaagagt gcctggaatg
721 tctttgactt tgttgttacc atgttggtaa ggatagagat cctgagggtt cgtttagtgg
781 gatgaagaat gtgcctaggt gaatcgaaag aacaagttaa catgataata ggaaacaaaa
841 atttacttaa cttctttctt ttgatttttt tttcctaaaa ctaaacatca atcattgcag
901 gagttgttgg tattaggagc aaagtagact aactacaaca tcaatgccaa caagagcatc
961 tgccggttac tgagcactta ctaagtgcca agcactattt taagtgtttt ccttacatta
1021 tctcatttat gctccacaac aacctaatta aataaccatg aattttatcc ccctttttat
1081 atctgaacaa gttgaagtat agtgtttaag caacttaata tagaaaggct gaatagtaag
1141 cacttctcag agaatgctat tcaaaggata acgcccaggg aacaatgaag aggataagat
1201 gaagaaggtg caattctgcc tgggtgcctt ggggtgtatt ttacttataa cctgtgtgtt
1261 ttccacagtc cctgcttccc gaggttgtgg tattggtagg ggtaacaggc caatcggtgt
1321 ggcttcagct tctgaggatc tgccgggtgc tgaggtctct caaactcctt gcacaattcc
1381 gtcaaattcg agttattatt ttggtcctgg tcggggccct caaggtgatt tgactgttgc
1441 aagctaaagc agggggcaag gtagataaat gtgagggctt aacatagaat atgaaacaaa
1501 ttggccgggt gcggtggctc atgcctgtaa tcccagcact ttgggaggcc gagggggatg
1561 ggtcatgagg tcaggagttc gagaccagcc tgaccaacat ggtgaaaccc tgtctctact
1621 aaaaatacca aaaaaaaaaa aaaaa
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