LOCUS BC047441 1496 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens splA/ryanodine receptor domain and SOCS box containing
3, mRNA (cDNA clone MGC:51287 IMAGE:5303706), complete cds.
ACCESSION BC047441
VERSION BC047441.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1496)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1496)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: m Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38679885.
FEATURES Location/Qualifiers
source 1..1496
/db_xref="H-InvDB:HIT000098587"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51287 IMAGE:5303706"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1496
/gene="SPSB3"
/gene_synonym="SSB3"
/db_xref="GeneID:90864"
/db_xref="HGNC:HGNC:30629"
CDS 34..1101
/gene="SPSB3"
/gene_synonym="SSB3"
/codon_start=1
/product="splA/ryanodine receptor domain and SOCS box
containing 3"
/protein_id="AAH47441.2"
/db_xref="GeneID:90864"
/db_xref="HGNC:HGNC:30629"
/translation="MARRPRNSRAWHFVLSAARRDADARAVALAGSTNWGYDSDGQHS
DSDSDPEYSTLPPSIPSAVPVTGESFCDCAGQSEASFCSSLHSAHRGRDCRCGEEDEY
FDWVWDDLNKSSATLLSCDNRKVSFHMEYSCGTAAIRGTKELGEGQHFWEIKMTSPVY
GTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYTGLLHHKGDKTSFPSRFGQGS
IIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKRFYPMVCSTAARSSMKVTSSCASATS
LQYLCCHRLRQLRPDSGDTLEGLPLPPGLKQVLHNKLGWVLSMSCSRRKAPVSDPQAA
TSAHRSSREPRPCQRKRCRRT"
BASE COUNT 282 a 483 c 458 g 273 t
ORIGIN
1 agcgggcagc gggggctgca gattctttcc accatggcca gacgcccccg gaacagcagg
61 gcctggcact tcgtcctgag tgcagcccgc cgagacgcag atgcccgggc cgtggctcta
121 gcaggctcca ctaactgggg ctacgactct gatgggcagc acagcgactc ggactccgac
181 cccgagtact ccacgctgcc gccatccatc cccagtgcgg tgcccgtgac cggcgagtcc
241 ttctgtgact gtgctgggca gagcgaggcc tccttctgta gcagcctgca ctcggcccac
301 cggggcaggg actgccgctg cggagaggaa gacgagtatt tcgactgggt ctgggatgac
361 ttaaataagt catcagccac cctgctgagc tgtgacaacc gtaaggtcag cttccacatg
421 gagtacagct gcggcacagc ggccatccgg ggcaccaagg agctggggga gggccagcac
481 ttctgggaga tcaagatgac ctctcccgtc tacggcaccg acatgatggt gggcatcggg
541 acgtcggatg tggacctgga caaataccgc cacacgttct gcagcctgct gggcagggat
601 gaggacagct ggggcctctc ctacacgggc ctcctccacc acaagggcga caagaccagc
661 ttcccgtcgc ggttcggcca gggctccatc attggcgtgc acctggacac ctggcacggc
721 acactcacct ttttcaagaa caggaagtgt ataggtgtgg cagccaccaa gctgcagaac
781 aagagattct acccgatggt gtgctccacg gcggcccgga gcagcatgaa ggtcaccagc
841 tcctgtgcca gcgccacttc cctccagtac ctgtgctgcc accgcctgcg ccagctgcgg
901 ccagactcgg gagacacgct ggagggtctg ccgctgccac cgggcctcaa gcaggtgcta
961 cacaacaagc tgggctgggt cctgagcatg agttgcagcc gccgcaaggc tccagtgtcc
1021 gatccccagg cagcgacctc cgcccaccgc agcagtcgcg agcctcggcc ctgccagagg
1081 aagcgctgcc gccggacctg actgacttcc cagtggaact gccttcttgg gctgggacag
1141 cccctttcct ctgtcccttc tttctctgtc ccttccttcc agccacactc cagggcggag
1201 ttggatgagg cccgtccgga gggagccatc tcttgctccc gaggctggga cagtcctttc
1261 tgtgggggct ctagggcccc tctgctgctg tgctgggtgg ggaagcggct gccctgagcc
1321 ccaggtcttg tgggaggctg cgaggacgag agcctggctg gagcccgcgt tgctgttcac
1381 acagggcctc ggtttttcct aacttgctct gcatgctgtc agcggctgcc ccgccgtcat
1441 agacttaaag gactgcaata aatgtagagt tgatgtctaa caaaaaaaaa aaaaaa
//