LOCUS BC047440 1476 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens COMM domain containing 7, mRNA (cDNA clone MGC:48469
IMAGE:5275167), complete cds.
ACCESSION BC047440
VERSION BC047440.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1476)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1476)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29789284.
FEATURES Location/Qualifiers
source 1..1476
/db_xref="H-InvDB:HIT000053133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48469 IMAGE:5275167"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1476
/gene="COMMD7"
/gene_synonym="dJ1085F17.3"
/gene_synonym="FLJ14987"
/db_xref="GeneID:149951"
/db_xref="HGNC:HGNC:16223"
CDS 179..781
/gene="COMMD7"
/gene_synonym="dJ1085F17.3"
/gene_synonym="FLJ14987"
/codon_start=1
/product="COMM domain containing 7"
/protein_id="AAH47440.1"
/db_xref="GeneID:149951"
/db_xref="HGNC:HGNC:16223"
/translation="MGRLHCTEDPVPEAVGGDMQQLNQLGAQQFSALTEVLFHFLTEQ
KEVERFLAQLSEFATTNQISLGSLRSIVKSLLLVPNGALKKSLTAKQVQADFITLGLS
EEKATYFSEKWKQNTPTLARWAIGQTLMINQLIDMEWKFGVTSGSSELEKVGSIFLQL
KLVVKKGNQTKNVYIELTLPQFYSFLHEMERVRTSMECFC"
BASE COUNT 368 a 367 c 405 g 336 t
ORIGIN
1 gagggctccc cggctccgga cagcccaggg cggccggggg aggagtgcgc tgcgacggcc
61 gtggcgaaag tgcggttgtg gatgcgcgga gaggccggca gcggtggcag cggcagcgga
121 ggaggaagct gagcagggcg gcggcggcgg tggaacctgc ggggctgggg cgcgcgccat
181 gggccgcctg cactgcactg aggacccggt gccggaggcc gtgggcggcg acatgcagca
241 gctgaaccag ctgggcgcgc agcagttctc agccctgaca gaggtgcttt tccacttcct
301 aactgagcaa aaagaggtgg aaagatttct ggctcagctc tctgaatttg ccaccaccaa
361 tcagatcagt cttggctccc tcagaagcat cgtgaaaagc ctccttctgg ttccaaatgg
421 tgctttgaag aagagtctca cagccaagca ggtccaggcg gatttcataa ctctgggtct
481 tagtgaggag aaagccactt acttttctga aaagtggaag cagaatactc ccacccttgc
541 tcgatgggcc ataggtcaga ctctgatgat taaccagctc atagatatgg agtggaaatt
601 tggagtgaca tctgggagca gcgaattgga gaaagtggga agtatatttt tacaactaaa
661 gttggtggtt aagaaaggaa atcaaaccaa aaatgtgtat atagaattaa ccttgcctca
721 gttctacagc ttcctgcacg agatggagcg agtcagaacc agcatggagt gtttctgctg
781 atttctgtcc ctgcatctcc cctagccccg ttccctgccc tcctcccttc cctgggtgac
841 tgctctgaga ggcacttcac tcacaggcct gtgggatgct ccatggggcc ctgctggctc
901 catggggccc aggtgcaaag ggtttctgaa aaacagcagg attaagtact gaaagagccc
961 aacacaatta ccctgtaaac tctctgttag ggcaaccacc accacctgtc ttccaggaca
1021 catttttaga tactctgaca ggccactgca tctcagattc aggggagaaa ataagttgtc
1081 acctcccctt caaagttcca gagtaaacaa atggtgccat cattcaagat aacatgctga
1141 tcaccctcct cccaaaaagc aagagcttgt ttatggctga ggaatcggcg gattgtctga
1201 atgacacata tacagagccc ccacggattt ctgcacactc tgggtctgtg ctggtggaac
1261 attgccaatc agttcttaat gaggcacctg tgtgtaaata catgcttggt cttctctgca
1321 gagaactgag gctaaactct gtccctactt ctggttttgc cctgtcatgt cgtaacgagg
1381 tgggcctttt gaggccattt tagtttgagt tcgagccaac cacctctgtt ggttagatga
1441 tgaataaaaa ggttctgaag aaaaaaaaaa aaaaaa
//