LOCUS BC047374 1869 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 36 (proton/amino acid
symporter), member 4, mRNA (cDNA clone MGC:48630 IMAGE:5313230),
complete cds.
ACCESSION BC047374
VERSION BC047374.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1869)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1869)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807350.
FEATURES Location/Qualifiers
source 1..1869
/db_xref="H-InvDB:HIT000053118"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48630 IMAGE:5313230"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1869
/gene="SLC36A4"
/gene_synonym="FLJ38932"
/gene_synonym="PAT4"
/db_xref="GeneID:120103"
/db_xref="HGNC:HGNC:19660"
CDS 111..1625
/gene="SLC36A4"
/gene_synonym="FLJ38932"
/gene_synonym="PAT4"
/codon_start=1
/product="solute carrier family 36 (proton/amino acid
symporter), member 4"
/protein_id="AAH47374.1"
/db_xref="GeneID:120103"
/db_xref="HGNC:HGNC:19660"
/translation="MEAAATPAAAGAARREELDMDVMRPLINEQNFDGTSDEEHEQEL
LPVQKHYQLDDQEGISFVQTLMHLLKGNIGTGLLGLPLAIKNAGIVLGPISLVFIGII
SVHCMHILVRCSHFLCLRFKKSTLGYSDTVSFAMEVSPWSCLQKQAAWGRSVVDFFLV
ITQLGFCSVYIVFLAENVKQVHEGFLESKVFISNSTNSSNPCERRSVDIRIYMLCFLP
FIILLVFIRELKNLFVLSFLANVSMAVSLVIIYQYVVRNMPDPHNLPIVAGWKKYPLF
FGTAVFAFEGIGVVLPLENQMKESKRFPQALNIGMGIVTTLYVTLATLGYMCFHDEIK
GSITLNLPQDVWLYQSVKILYSFGIFVTYSIQFYVPAEIIIHGITSKFHTKWKQICEF
GIRSFLVSITCAGAILIPRLDIVISFVGAVSSSTLAIILPPLVEILTFSKEHYNIWMV
LKNISIAFTGVVGFLLGTYITVEEIIYPTPKVVAGTPQSPFLNLNSTCLTSGLK"
BASE COUNT 537 a 335 c 407 g 590 t
ORIGIN
1 accaggcgcg ggtccctccg ggcaggggag gtaggcctgg gcctgacgcc ggccacgcag
61 cggcgggaga gtgagcactc gggcggcggc gtcctggaga cccgcgagag atggaagcgg
121 cggcgacgcc ggcggctgcc ggggcggcga ggcgcgagga gctagatatg gatgtaatga
181 ggcccttgat aaatgagcag aattttgatg ggacatcaga tgaagaacat gagcaagagc
241 ttctgcctgt tcagaagcat taccaacttg atgatcaaga gggcatttca tttgtacaaa
301 ctcttatgca ccttcttaaa ggaaatattg gaactggcct tttaggactt ccattggcaa
361 taaaaaatgc aggcatagtg cttggaccaa tcagccttgt gtttatagga attatttctg
421 ttcactgtat gcacatattg gtacgttgca gtcactttct atgtctgagg tttaaaaagt
481 caacattagg ttatagtgac actgtgagct ttgctatgga agtgagtcct tggagttgtc
541 ttcagaagca agcagcatgg gggcggagtg tggttgactt ttttctggtg ataacacagc
601 tgggattctg tagtgtttat attgtcttct tagctgaaaa tgtgaaacaa gttcatgaag
661 gattcctgga gagtaaagtg tttatttcaa atagtaccaa ttcatcaaac ccttgtgaga
721 gaagaagtgt tgacataagg atatatatgc tttgctttct tccatttata attcttttgg
781 tcttcattcg tgaactaaag aatctatttg tactttcatt ccttgccaac gtttccatgg
841 ctgtcagtct tgtgataatt taccagtatg ttgtcaggaa catgccagat ccccacaacc
901 ttccaatagt ggctggttgg aagaaatacc cactcttttt tggtactgct gtatttgctt
961 ttgaaggcat aggagtggtc cttccactgg aaaaccaaat gaaagaatca aagcgtttcc
1021 ctcaagcgtt gaatattggc atggggattg ttacaacttt gtatgtaaca ttagctactt
1081 taggatatat gtgtttccat gatgaaatca aaggcagcat aactttaaat cttccccaag
1141 atgtatggtt atatcaatca gtgaaaattc tatattcgtt tggcattttt gtgacatatt
1201 caattcagtt ctatgttcca gcagagatca ttatccatgg gatcacatcc aaatttcata
1261 ctaaatggaa gcaaatctgt gaatttggga taagatcctt cttggttagt attacttgtg
1321 ccggagcaat tcttattcct cgtttagaca ttgtgatttc cttcgttgga gctgtgagca
1381 gcagcacatt ggccataatc ctgccacctt tggttgaaat tcttacattt tcgaaggaac
1441 attataatat atggatggtc ctgaaaaata tttctatagc attcactgga gttgttggct
1501 tcttattagg tacatatata actgttgaag aaattattta tcctactccc aaagttgtag
1561 ctggcactcc acagagtcct tttctaaatt tgaattcaac atgcttaaca tctggtttga
1621 aatagtaaaa gcagaatcat gagtcttcta tttttgtccc atttctgaaa attatcaaga
1681 taactagtaa aatacattgc tatatacata aaaatggtaa caaactctgt tttctttggc
1741 acgatattaa tattttggaa gtaatcataa ctctttacca gtagtggtaa acctatgaaa
1801 aatccttgct tttaagtgtt agcaatagtt caaaaaatta agttctgaaa attgaaaaaa
1861 aaaaaaaaa
//