LOCUS BC047368 4283 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens outer dense fiber of sperm tails 2-like, mRNA (cDNA
clone MGC:48473 IMAGE:5276959), complete cds.
ACCESSION BC047368
VERSION BC047368.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4283)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4283)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: f Column: 12.
FEATURES Location/Qualifiers
source 1..4283
/db_xref="H-InvDB:HIT000053117"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48473 IMAGE:5276959"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4283
/gene="ODF2L"
/gene_synonym="dJ977L11.1"
/gene_synonym="KIAA1229"
/gene_synonym="RP5-977L11.1"
/db_xref="GeneID:57489"
CDS 310..1413
/gene="ODF2L"
/gene_synonym="dJ977L11.1"
/gene_synonym="KIAA1229"
/gene_synonym="RP5-977L11.1"
/codon_start=1
/product="ODF2L protein"
/protein_id="AAH47368.1"
/db_xref="GeneID:57489"
/translation="MEKAVNDGSHSEELFCHLKTISEKEDLPRCTSESHLSCLKQDIL
NEKTELEATLKEAELVTHSVELLLPLFKDTIEKINFENANLSALNLKISEQKEILIKE
LDTFKSVKLALEHLLRKRDYKQTGDNLSSMLLGNLTDNESENTNLKKKVFEKEAHIQE
LSCLFQSEKANTLKANRFSQSVKVVHERLQIQIHKREAENDKLKEYVKSLETKIAKWN
LQSRMNKNEAIVMKEASRQKTVALKKASKVYKQRLDHFTGAIEKLTSQIRDQEAKLSE
TISASNAWKSHYEKIVIEKTELEVQIETMKKQIINLLEDLKKMEDHGKNSCEEILRKV
HSIEYENETLNLENTRLKTTLAALKDEVVSVEN"
BASE COUNT 1643 a 779 c 855 g 1006 t
ORIGIN
1 actgagcggg cactcttctg cggcaagcag gtctaggaat tcgcctggtt cccacctcgc
61 gtcccttgcc ttccttccta gtctacccac tgtagtgccc cctgcgtccc gctccctcct
121 agccgactca gagcacaaga aggattgcca cggtttccat tgcagcagcc gtggcgcctc
181 tgaccctttt tttatatcgc ggcgacggcg ggctgtcgtc acgacgacgt gcggacgcag
241 cggcgggggc ctttcagctt atgtggagaa gtcgctgtga agccacctat aaatccattt
301 actgaattta tggagaaggc tgtaaatgat ggaagtcatt cagaagaact cttttgccat
361 cttaaaacta tatcagagaa agaagattta ccacggtgca ccagtgaaag tcatctcagc
421 tgcctgaagc aggacattct aaatgaaaag actgaattgg aagcaacact taaggaagcg
481 gagttggtaa ctcattctgt agaattgctt ttgccactat ttaaggacac cattgaaaag
541 attaattttg aaaatgcgaa tctttctgca ttgaatttga agatttctga acagaaggaa
601 atattaataa aagaattaga caccttcaaa agtgtaaaac tagctttaga acatcttctt
661 agaaagagag actacaaaca aacaggagac aatttatcca gcatgttgct aggaaatcta
721 actgataatg aaagtgaaaa tactaatctt aagaagaagg tatttgaaaa ggaggcccat
781 atccaagaac tttcttgttt gtttcagagt gaaaaggcaa atactttgaa agcaaaccgt
841 ttttcccaat cagtaaaagt agtacatgaa cgactacaga tccaaattca taaaagggaa
901 gccgagaacg ataagttgaa agaatatgta aagagcttag aaaccaagat agccaagtgg
961 aacctgcaat caagaatgaa taagaatgag gctatagtga tgaaagaagc aagtaggcaa
1021 aaaactgtag ctttaaaaaa ggcatctaaa gtttacaaac aaaggcttga ccattttaca
1081 ggagctattg aaaagcttac ttcccaaatt agagatcagg aagccaagtt gtctgaaaca
1141 atttcagctt ccaatgcctg gaaaagtcat tatgagaaaa ttgtaataga aaaaaccgaa
1201 ttggaagtac agattgaaac aatgaaaaag caaatcatta atcttttgga agatctgaag
1261 aaaatggaag accatggaaa aaattcatgt gaagaaattc ttagaaaagt tcactcaatt
1321 gaatatgaaa atgaaactct gaatcttgag aatacaagat taaagactac acttgctgct
1381 ttgaaggatg aagttgtatc tgttgaaaat taactctcag aattgcaaga agtagaaaaa
1441 aaacagaaaa cccttattga aatgtataaa actcaggtac aaaagttgca agaagcagct
1501 gaaatagtaa aaagcagatg tgaaaatttg ctacataaaa ataaccaaat aacaaaaacc
1561 aaaaataaaa atgtagagaa gatgagaggc cagatggagt ctcatctgaa ggagttagag
1621 cgtgtctgcg attccttgac ggcggcggaa cggaggcttc acgagtgtca ggagagtctg
1681 cagtgctgca aggggaagtg tgcagaccag gaacacacca ttagggagct tcagggccag
1741 attttgaagc agtgggaaga atattctgtc ttggcatggg ttgatggaaa tcacaatctt
1801 ctgacaaagc tttctctgga agaggaaaac tgtcttattc agctgaagtg tgaaaacctt
1861 caacaaaaat tagaacagat ggacgcagaa aataaagagc ttgagaagaa gctggcaaac
1921 caagaagaat gtcttaagca cagcaatctt aagtttaaag agaaatctgc agaatataca
1981 gcattggcca gacaactgga agctgcttta gaagaaggaa gacaaaaggt tgctgaagaa
2041 atagagaaaa tgtcatctag agagagtgct ttacaaatta aaatattaga tctggaaact
2101 gagcttagaa agaaaaatga agagcaaaat caacttgttt gcaaaatgaa cagtgatcca
2161 gagactccat gaaatctatt tttttaattc ccaagtgtct aaaaagttga aaacctaaaa
2221 gattcaagag ttaaatgatt tttggcatgc acaatttgat tttattgcca tcaaaagttt
2281 catgacaact tagtcagaac aaaacgtcga tcacctttaa tttagcacag gccttccatt
2341 tatttctaaa ctttttttaa ctcaccattt gactttctga tattgtaaaa tgtgtgtgct
2401 gtttttttgt gtaattgaag cctctaaaaa aataaatgag gtgggttttg ctgtaatgtc
2461 cctagtactt ggctaaagct agtaaaataa atagatccca ttcacaattg ccacaaagag
2521 aataaaatac ctaggaatcc aaattacaag gaatgtgaag gacctcttca aggagaacta
2581 caaaccactg cttaaggaaa taagagagga cacaaacaaa tggaaaacat tccatgctta
2641 tgaataaaat gaaacaagat catgagaatg gctatactcc ccaaagtaat ttatagattc
2701 agtgctatcc ccatcaagct accattgact ttcttcacag aattagaaaa aactacttca
2761 aatttcatat ggaaccaaaa aagagctcac ataaccaaga caatcctaag caaaaagaac
2821 aaagctgtag gcatcacgct acctgacttc aaactatact acaaggctac agtaaccaaa
2881 atagcatggt actggtgcca aaacagatat atagaccaat ggaacagaac agaggcctca
2941 gaaataactc cacacatcta taaccatctg atgtttgaca tacctgagaa aaacaagaaa
3001 tggggaaagg attccctatt taataaatgg tgttgggaaa actggctagc catatgcaga
3061 aaactgaaac tggatccctt ccttacacct tatacaaaaa ttaactcaag atggattaaa
3121 gacttaagtg taagacctaa aaccataaaa accctagagg aaaacctagg caataccatt
3181 caggacatag gcatggacga atacttcatg actaaaacac caaaagtaat ggcaataaaa
3241 gccaagattg acaaatggga tctaattaaa ctaaagagct tctgcacagc aaaagaaact
3301 atcatcagag tgaacaggaa ccgacagaat gggagaaaat ttttgcaatc tatccatctg
3361 acaaagggcc aatatccaga atctacaaag aacttaaaca aatttacaag aaaaaaaacc
3421 ccatcaaaaa gtgtgcaaag aatatgaaca gacacttctc aagagaagac atttagtcag
3481 ccaaaaaaca tatgaaaaaa agctcatcac tggtcattca gagaaatgca aatcaaaact
3541 acagtgagat accatgtcac accaattaga atggtgatca ttaaaaagac aggaaacaac
3601 agatgctgga gaggatgtgg agaaatagga tgcttttaca ctgttggtgg gagtgtaaat
3661 tagttcaacc actgcggaag acagtgtggc gattcctcaa ggatctagaa ccagaaatac
3721 catttgaccc agcaatccca ttactgggta tatacccaaa ggactataaa tcatgctgct
3781 atagagacac atgcacacgt atatttattg tggcactatt cacaatagca aagacttgga
3841 gccaacccaa atgcccatca atgatagact gaataaagaa aatgtggcac atacaccatg
3901 gaatactatg cagccataaa aaaggatgag ttcatgtcct ttgcagggac atggatgaag
3961 ctggaaacca tcattctcag caaactaaca caagaacaga aaaccaaaca ccgcatgttc
4021 tcactcataa gtgggagttg aacaatgaga atacatggat acagggcagg gaacatcaca
4081 caccagggcc tgtcagggcg tggggggcta ggggagggat aacattagaa attcctaatg
4141 tagatgacgg gttgatgagt gcagcaaacc accatggcac gtgtatacct atgtaaccaa
4201 cctgtacgtt ctgtacatgt atcccagaac ttaaagtata ataaaaatta aaaaaaataa
4261 agatctgaaa aaaaaaaaaa aaa
//