LOCUS BC047363 2714 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 16, mRNA
(cDNA clone MGC:48460 IMAGE:5269539), complete cds.
ACCESSION BC047363
VERSION BC047363.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2714)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2714)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56687497.
FEATURES Location/Qualifiers
source 1..2714
/db_xref="H-InvDB:HIT000053116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48460 IMAGE:5269539"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2714
/gene="DNAJC16"
/gene_synonym="KIAA0962"
/gene_synonym="RP4-680D5.1"
/db_xref="GeneID:23341"
/db_xref="HGNC:HGNC:29157"
CDS 165..2513
/gene="DNAJC16"
/gene_synonym="KIAA0962"
/gene_synonym="RP4-680D5.1"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily C, member 16"
/protein_id="AAH47363.1"
/db_xref="GeneID:23341"
/db_xref="HGNC:HGNC:29157"
/translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQAD
IKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQ
KQQQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKK
PYLIKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSI
LGIINGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLL
FDQTPIVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHIN
RPADVIQARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLT
AETTKLSKPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSIL
ERRNTAGRVVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPV
FLLRWFYSASDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDER
ESSPPEKEEAQEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMN
VVLILSNSTKTSLLQKFALEVYTFTGSSCLHFSFLSLDKHREWLEYLLEFAQDAAPIP
NQYDKHFMERDYTGYVLALNGHKKYFCLFKPQKTVEEEEAIGSCSDVDSSLYLGESRG
KPSCGLGSRPIKGKLSKLSLWMERLLEGSLQRFYIPSWPELD"
BASE COUNT 762 a 642 c 621 g 689 t
ORIGIN
1 aagcgtcacg tgactcccct cgggcttgtc ccctcctctt tcccctcccc aggcccaggc
61 gagcgctggt gtggacggga agctcccggc ccggcgaact aactggagca cggagctgca
121 gccggttggg ccggtgtact ttcccgctct ggaaaggaag agaaatggaa gtgagaaagt
181 tgagcatttc ctggcagttc ttgatagttc tggttctgat cctgcaaatt ctgtctgcgt
241 tggattttga cccatacaga gtcctagggg tcagccgaac agccagtcag gctgatatta
301 aaaaggctta taagaagctc gcccgggaat ggcatcctga caaaaacaaa gatcctggag
361 cagaagacaa gttcattcaa atcagtaagg cttacgagat tctttcaaat gaagaaaaga
421 gatcaaatta tgatcaatat ggagacgctg gagagaacca gggctaccag aagcagcaac
481 agcagcgaga gtatcgcttc cgccatttcc atgaaaattt ttattttgat gaatcctttt
541 ttcacttccc ttttaattct gaacggcggg actcaattga cgaaaagtat ttattgcact
601 tttcacatta tgtgaatgaa gtggttccag atagcttcaa gaaaccctac ctcatcaaga
661 tcacctccga ttggtgcttt agctgcattc atatcgagcc tgtgtggaaa gaagtcattc
721 aagaactgga agaattgggt gtaggaattg gcgtggtcca tgctgggtat gagagacgcc
781 tggcccatca cctaggggca cacagcacgc cctctatcct aggaatcatt aacgggaaaa
841 tctccttctt ccacaatgca gttgtccgtg aaaatctgcg acaatttgta gaaagtcttc
901 ttccagggaa cttggtggag aaagttacaa ataaaaatta cgtcagattc ctctctggct
961 ggcagcaaga gaataagcct catgtccttc tgtttgacca aacgcccatt gtgccactgt
1021 tatacaagtt gactgccttt gcatacaaag attatttatc atttggatat gtatatgtgg
1081 gtttgagagg gacggaagag atgacaaggc ggtacaacat caatatctac gcccctaccc
1141 tcttggtctt taaagaacat ataaacaggc ctgccgatgt tatccaggcc cgaggtatga
1201 agaagcaaat cattgacgac ttcatcaccc gaaacaaata tctattggca gccaggctca
1261 ccagccagaa gttgttccat gaactctgcc ctgtgaaacg gtcgcatcga cagaggaagt
1321 actgtgtggt tttattgact gctgagacta ccaagttgag caaacccttt gaggctttcc
1381 tgtcctttgc cctggcaaac actcaagaca cagtgagatt tgtgcatgtc tacagcaatc
1441 ggcagcagga gtttgccgac accttactac cagacagtga ggcgtttcaa gggaaatcag
1501 cggtgtctat tttagaaagg cgcaacacag caggaagggt ggtgtataaa accctggaag
1561 acccttggat tgggagtgag agtgacaaat ttatcctctt gggctatctc gaccagctgc
1621 gtaaagatcc agctcttctg tcctctgaag cagtgcttcc tgacctgacc gatgaacttg
1681 cccctgtttt tctccttcga tggttctact ctgcttctga ctacatctca gactgctggg
1741 atagcatttt tcacaacaac tggagggaaa tgatgcccct gctgtccctg atcttctctg
1801 ccctcttcat cctcttcggc actgtcatcg ttcaggcttt cagcgactct aatgatgagc
1861 gagagtcaag ccctccagaa aaagaggaag cccaagagaa gactgggaaa actgagccaa
1921 gcttcaccaa agaaaacagc agcaagattc ctaaaaaagg ctttgtggag gtaactgaac
1981 tcacagatgt aacatacacc agtaacttgg tacgtctgag gccaggccac atgaatgtgg
2041 tcctcatcct gtcgaattct accaagacca gcctactaca gaaatttgct ttggaggtct
2101 acacatttac tgggagcagc tgcctacact tctccttcct gagtctagat aaacacagag
2161 aatggctaga atacttacta gaatttgctc aagatgcagc tccaatccca aaccaatatg
2221 ataagcattt catggagcgt gactacactg gttatgtact ggctctgaat ggccacaaga
2281 aatacttctg cctcttcaag ccccaaaaga cagtcgaaga ggaggaagcc atagggtcgt
2341 gcagtgatgt tgactcttcc ctctacctgg gtgaatctcg agggaaacct tcctgtggcc
2401 ttggatccag gcccatcaaa ggaaagttga gcaagctctc tttatggatg gaacgcctgc
2461 tggagggctc cttacagagg ttttatatcc catcatggcc tgaactagac tgagaggatt
2521 ttccaaagag atttgaactc ttcagacttt ttaacatgcc cctgtgaaca ggtattttca
2581 ggactcaaac taccacaatg aacagagtat agattttaga ttgctcttct agaaccatgg
2641 ctagaagaat ctttcctttg tcctgttcta acctaggaat gaaaaacacc accagttcga
2701 aaaaaaaaaa aaaa
//