LOCUS BC047333 1180 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spermatogenesis associated 9, mRNA (cDNA clone
MGC:51802 IMAGE:5166271), complete cds.
ACCESSION BC047333
VERSION BC047333.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50659063.
FEATURES Location/Qualifiers
source 1..1180
/db_xref="H-InvDB:HIT000053114"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51802 IMAGE:5166271"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1180
/gene="SPATA9"
/gene_synonym="FLJ35906"
/gene_synonym="NYD-SP16"
/db_xref="GeneID:83890"
/db_xref="HGNC:HGNC:22988"
/db_xref="MIM:608039"
CDS 143..907
/gene="SPATA9"
/gene_synonym="FLJ35906"
/gene_synonym="NYD-SP16"
/codon_start=1
/product="spermatogenesis associated 9"
/protein_id="AAH47333.1"
/db_xref="GeneID:83890"
/db_xref="HGNC:HGNC:22988"
/db_xref="MIM:608039"
/translation="MPIKPVGWICGQVLKNFSGRIEGIQKAIMDLVDEFKDEFPTILR
LSQSNQKREPAQKTSKIRMAIALAKINRATLIRGLNSISRSSKSVAKLLHPQLACRLL
ELRDISGRLLREVNAPRQPLYNIQVRKGSLFEIISFPAKTALTSIIYASYAALIYLAV
CVNAVLKKVKNIFQEEESIRQNREESENCRKAFSEPVLSEPMFAEGEIKAKPYRSLPE
KPDISDYPKLLANKQSNNIQVLHSVFDQSAEMNEQI"
BASE COUNT 437 a 213 c 230 g 300 t
ORIGIN
1 ccagcagtga gctgtgagtt ctgtccttgc tggctttccc aagtggaagg ctaccctcat
61 ctttcactaa tggcagacta ggacaagcat tacccaggcc tgcaagcttg ttaaggacta
121 ggaacccaag caagaactca ccatgccaat caaacctgtt gggtggatat gtgggcaggt
181 gttgaagaac ttttctggaa gaatcgaggg gatccagaaa gcaatcatgg accttgtaga
241 tgagtttaaa gatgaatttc ccaccatcct aagattatca cagtctaatc agaaaagaga
301 acctgcgcag aaaacatcca aaatcaggat ggctattgct ttagctaaga ttaatcgagc
361 aacattaatt cgtggattaa acagcatatc cagatcctcc aaatcagtgg ccaaacttct
421 gcatcctcag cttgcatgca gacttttaga gctaagggac atatctggtc gtctgctgag
481 ggaagttaat gcgccgaggc aacccctata taacattcag gtcagaaagg gttctttgtt
541 tgaaatcatc tcctttccag caaagactgc tttaactagc ataatatatg cttcatatgc
601 agcactaatt tatttggcag tctgtgttaa tgctgtgctg aagaaggtaa agaacatctt
661 ccaggaagaa gaatccataa ggcaaaacag agaggagagt gaaaattgta gaaaagcctt
721 ttctgagcct gtgctttcgg agcctatgtt tgctgaaggt gaaatcaaag caaaacctta
781 taggtcattg ccggagaagc cagacatttc agattacccc aagcttcttg ctaataagca
841 gagtaataac atccaagttt tacattctgt gtttgaccaa tcagctgaaa tgaatgagca
901 aatctgaata caggtatcac tgaacagaac ttaagagtta tctatttaat ggcacatttc
961 atctgacaaa actcagagtc tagtttacat attctgaatt gctctgcttt cttaaaaaaa
1021 agagaagggg gctactatta aaatgtcatt ttctagtatt tacatgatag agtaaataaa
1081 atgaatattg atgtggaata aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//