LOCUS BC047306 1464 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 28, mRNA (cDNA clone
MGC:54311 IMAGE:4999965), complete cds.
ACCESSION BC047306
VERSION BC047306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1464)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1464)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33285014.
FEATURES Location/Qualifiers
source 1..1464
/db_xref="H-InvDB:HIT000053106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54311 IMAGE:4999965"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1464
/gene="LRRC28"
/gene_synonym="FLJ34269"
/gene_synonym="FLJ45242"
/gene_synonym="MGC24976"
/db_xref="GeneID:123355"
/db_xref="HGNC:HGNC:28355"
CDS 156..1259
/gene="LRRC28"
/gene_synonym="FLJ34269"
/gene_synonym="FLJ45242"
/gene_synonym="MGC24976"
/codon_start=1
/product="leucine rich repeat containing 28"
/protein_id="AAH47306.1"
/db_xref="GeneID:123355"
/db_xref="HGNC:HGNC:28355"
/translation="MASELCKTISVARLEKHKNLFLNYRNLHHFPLELLKDEGLQYLE
RLYMKRNSLTSLPENLAQKLPNLVELYLHSNNIVVVPEAIGSLVKLQCLDLSDNALEI
VCPEIGRLRALRHLRLANNQLQFLPPEVGDLKELQTLDISTNRLLTLPERLHMCLSLQ
YLTVDRNRLWYVPRHLCQLPSLNELSMAGNRLAFLPLDLGRSRELQYVYVDNNIHLKG
LPSYLYNKVIGCSGCGAPIQVSEVKLLSFSSGQRTVFLPAEVKAIGTEHDHVLPLQEL
AMRGLYHTYHSLLKDLNFLSPISLPRSLLELLHCPLGHCHRCSEPMFTIVYPKLFPLR
ETPMAGLHQWKTTVSFVAYCCSTQCLQTFDLLS"
BASE COUNT 356 a 392 c 329 g 387 t
ORIGIN
1 ccctcgcctg gctccctgcc ccgccccgcc cgccgtcccc cgcttggctt ccagcgccgc
61 ttgcgctccg gagcgctggc tctgctggcg ctgagaaatg gaccaatttt gacaagatat
121 agtgctgcag cgtgcctgat gggatatatt cagtcatggc gtccgaactt tgtaagacga
181 tctctgtggc aaggctagaa aagcacaaga atttgttctt aaattatagg aatctgcacc
241 attttccatt ggagttactg aaagatgagg gactgcagta cttggagaga ctctatatga
301 aaaggaactc cctgacatcc ttgccagaaa accttgctca gaagcttcca aaccttgtgg
361 aactatacct gcactcaaat aacatagttg tggttccgga agccattggg tctcttgtaa
421 aactccaatg tctggatctt agtgacaatg ccttagaaat tgtttgccca gaaattggtc
481 gtctgagagc tttacgtcat cttcgattag ctaataacca actgcaattc ctacctccag
541 aggttggcga tttgaaggag ctgcagacac tagacatttc taccaatcgt ttgctaactt
601 tacccgagag gcttcacatg tgcctttctc tgcagtacct cactgtggac cgaaatcgtc
661 tatggtatgt gccgcgccat ctctgccagc tgcccagcct caatgagctc tccatggctg
721 gaaaccgtct tgcatttttg ccacttgatt taggtcgatc tcgagaacta cagtatgtat
781 acgtggataa caacattcac ctgaaaggct tgccatctta tctgtacaat aaagtcatcg
841 ggtgcagtgg ctgtggtgct cccattcaag tttccgaggt gaagctgctt tccttttcat
901 cagggcagcg aaccgttttc ctcccagctg aggtgaaggc catagggacg gagcatgatc
961 acgtcctccc tctgcaggaa ttggctatga gagggctgta tcatacctac cacagcttgc
1021 tgaaagattt gaactttctg tctccaatct cattacccag aagtctccta gagctgctgc
1081 actgccctct ggggcactgt catcggtgta gtgagcctat gtttaccatc gtctacccca
1141 agctctttcc cttgagagag acgccaatgg cagggctgca ccagtggaag acaactgtta
1201 gttttgtggc ttactgctgc tccacccagt gtctgcagac ttttgacctg ctgagttgat
1261 aaacactcaa gaacctcagg agcgctgcca gcttgacact ggggaatcca gccagtccag
1321 cacactcttc catcctgtcc tgtccaatgc gggggcactg cagaactctc tagaaatgtc
1381 atgattgagc ttcagagcta aaatgccttc acccttcccc caagttggaa tatatcctcc
1441 cccaaattaa aaaaaaaaaa aaaa
//