LOCUS BC047303 1740 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 134, mRNA (cDNA clone
MGC:54124 IMAGE:4914615), complete cds.
ACCESSION BC047303
VERSION BC047303.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1740)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1740)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376368.
FEATURES Location/Qualifiers
source 1..1740
/db_xref="H-InvDB:HIT000053105_10"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54124 IMAGE:4914615"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1740
/gene="C6orf134"
/gene_synonym="FLJ13158"
/gene_synonym="Nbla00487"
/db_xref="GeneID:79969"
/db_xref="HGNC:HGNC:21186"
CDS 319..1548
/gene="C6orf134"
/gene_synonym="FLJ13158"
/gene_synonym="Nbla00487"
/codon_start=1
/product="chromosome 6 open reading frame 134"
/protein_id="AAH47303.1"
/db_xref="GeneID:79969"
/db_xref="HGNC:HGNC:21186"
/translation="MWLTWPFCFLTITLREEGVCHLESVDLQQQIMTIIDELGKASAK
AQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHN
EVEPLCILDFYIHESVQRHGHGRELFQYMLQKERVEPHQLAIDRPSQKLLKFLNKHYN
LETTVPQVNNFVIFEGFFAHQHRPPAPSLRATRHSRAAAVDPTPAAPARKLPPKRAEG
DIKPYSSSDREFLKVAVEPPWPLNRAPRRATPPAHPPPRSSSLGNSPERGPLRPFVPE
QELLRSLRLCPPHPTARLLLAADPGGSPAQRRRTRGTPPGLVAQSCCYSRHGGVNSSS
PNTGNQDSKQGEQETKNRSASEEQALSQDGSGEKPMHTAPPQAPAPPAQSWTVGGDIL
NARFIRNLQERRSTRPW"
BASE COUNT 420 a 542 c 409 g 369 t
ORIGIN
1 atggagttcc cgttcgatgt ggacgcgctg ttcccggagc ggatcacggt gctggaccag
61 cacctgaggc ccccagcccg ccgacccgga accacaacgc cggcccggtg acagctcaaa
121 cccaccctct ggcccttttc tcccggttcc tcttcaaacc tggtccaggc accacgcccc
181 cttctcactg actagtgatc gccccttttg atgtccaggc ctgccttttt ggtgacctct
241 gaccctgggc ctagtgggat tgatcagcgc ttggatctgt gacctttcac cccgggccca
301 aaatgtccca atcaaaggat gtggttgacc tggcctttct gcttcctcac aataacctta
361 agggaggagg gagtgtgcca ccttgaaagt gttgatctac agcagcaaat tatgaccatt
421 atagatgaac tgggcaaggc ttctgccaag gcccagaatc tttccgctcc tatcactagt
481 gcatcaagga tgcagagtaa ccgccatgtt gtttatattc tcaaagacag ttcagcccga
541 ccggctggaa aaggagccat tattggtttc atcaaagttg gatacaagaa gctctttgta
601 ctggatgatc gtgaggctca taatgaggta gaaccacttt gcatcctgga cttttacatc
661 catgagtctg tgcaacgcca tggccatggg cgagaactct tccagtatat gttgcagaag
721 gagcgagtgg aaccgcacca actggcaatt gaccgaccct cacagaagct gctgaaattc
781 ctgaataagc actacaatct ggagaccaca gtcccacagg tgaacaactt tgtgatcttt
841 gaaggcttct ttgcccatca acatcggccc cctgctccct ctctgagggc aactcgacac
901 tctcgtgctg ctgcagtcga tcccacgccc gctgctccag caaggaagct gccacccaag
961 agagcagagg gagacatcaa gccatactcc tctagtgacc gagaatttct gaaggtagct
1021 gtggagcctc cttggcccct aaacagggcc cctcgccgcg ccacacctcc agcccaccca
1081 cccccccgct ccagcagcct gggaaactca ccagaacgag gtcccctccg cccctttgtg
1141 ccagagcagg agctgctgcg ttccttgcgc ctctgccccc cacaccctac cgcccgcctt
1201 ctgttggctg ctgaccctgg gggcagccca gctcaacgtc gtcgcaccag ggggactccc
1261 ccaggtctgg tagcccaaag ctgctgctac agccgccatg ggggggtgaa ttcctcatcc
1321 cccaatacag gcaaccaaga ctccaagcag ggagaacagg aaacaaagaa taggtctgcc
1381 agtgaggagc aggccttgtc acaggatggg tctggggaga agcccatgca cacagctcct
1441 ccacaggccc cggccccgcc agcccagtcc tggacagtgg gtggggacat actcaacgcc
1501 aggttcattc gaaacctgca ggaacgtcgc agcaccaggc cttggtgacc gcagccccgt
1561 caaacatctt caaagtatta tttctccctc actacaggaa agagccaaag cccaaccctc
1621 ataatagatg gatacattca ttcattcatt cattcagcag gcttatcaga ttcaagtcat
1681 ttgtatcttt taaccagacc aataaaagta tttattttta tcacaaaaaa aaaaaaaaaa
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