LOCUS       BC047109                4412 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens radixin, mRNA (cDNA clone MGC:48283 IMAGE:5284438),
            complete cds.
ACCESSION   BC047109
VERSION     BC047109.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4412)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4412)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 91 Row: g Column: 10
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 62244047.
FEATURES             Location/Qualifiers
     source          1..4412
                     /db_xref="H-InvDB:HIT000053090"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48283 IMAGE:5284438"
                     /tissue_type="Brain, hippocampus"
                     /clone_lib="NIH_MGC_95"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..4412
                     /gene="RDX"
                     /db_xref="GeneID:5962"
                     /db_xref="HGNC:HGNC:9944"
                     /db_xref="MIM:179410"
     CDS             211..1962
                     /gene="RDX"
                     /codon_start=1
                     /product="radixin"
                     /protein_id="AAH47109.1"
                     /db_xref="GeneID:5962"
                     /db_xref="HGNC:HGNC:9944"
                     /db_xref="MIM:179410"
                     /translation="MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWF
                     FGLQYVDSKGYSTWLKLNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLF
                     FLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEIHKPGYLANDRLLPQRVLEQ
                     HKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWL
                     GVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRI
                     NKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKEKREIAE
                     KEKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKE
                     RRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQHKAF
                     AAQEDLEKTKEELKTVMSAPPPPPPPPVIPPTENEHDEHDENNAEASAELSNEGVMNH
                     RSEEERVTETQKNERVKKQLQALSSELAQARDETKKTQNDVLHAENVKAGRDKYKTLR
                     QIRQGNTKQRIDEFEAM"
BASE COUNT         1471 a          744 c          897 g         1300 t
ORIGIN      
        1 attgcggagc tgtctgcggt ggcggcggcg cctctcgtct cccgcggccc agcgctcgca
       61 ccaccgcttc tccctccctg tcgcagccgc gccgccgcgc agcgccccag ccacacgccg
      121 gcgggcagaa gccgcccgct ctccggaaag tgataacaga attcattgaa gtggagaatt
      181 tttaaagaag gtaacaaaaa gagaaagaaa atgccgaaac caatcaacgt aagagtaact
      241 acaatggatg ctgagctgga atttgccatt cagcccaata caactggcaa acaacttttt
      301 gaccaggtgg tgaaaacagt tggtttgcgt gaggtctggt tttttgggct gcagtatgta
      361 gacagcaaag gttattctac atggcttaaa ctaaataaaa aggtaacaca gcaggatgtt
      421 aaaaaagaga atcctttaca gttcaagttt agagctaaat tctttcctga agatgtttct
      481 gaggaattaa ttcaagaaat aacccagaga ctcttcttct tgcaagttaa agaagccatc
      541 ttaaatgatg agatatattg cccgccagaa actgcagttc ttttggcttc ctatgctgtc
      601 caagccaagt atggagatta caataaagag attcataagc caggctacct ggctaatgat
      661 agactcctac cccagcgtgt attggaacaa cacaaactaa caaaagaaca gtgggaagaa
      721 agaatacaga actggcatga agaacataga ggaatgttaa gggaggattc tatgatggaa
      781 tacctgaaga ttgcacaaga tctagaaatg tatggagtca actattttga aataaaaaat
      841 aaaaaaggaa ctgaattgtg gctaggtgtt gatgctttgg gtctgaatat ttatgagcat
      901 gacgacaagt taacacctaa aattggtttt ccctggagtg aaatcagaaa tatttcattt
      961 aatgacaaaa aatttgttat aaagccaatc gacaaaaagg cacctgattt tgtgttttat
     1021 gcacctcgtc tgagaatcaa taagaggatt ttggccttat gtatgggaaa ccatgaacta
     1081 tacatgcgaa gaaggaagcc tgatactatt gaagtacaac agatgaaggc tcaggctagg
     1141 gaggagaaac atcagaagca gttggaaagg gcacaattag agaatgaaaa ggagaaaaga
     1201 gaaatagcag aaaaggaaaa ggaaagaata gaacgtgaaa aggaagagct aatggaacgt
     1261 ctaaaacaaa ttgaagagca gacaattaaa gctcagaaag aactagaaga acagactcga
     1321 aaagctctag aactggatca agaacgaaaa cgagcaaaag aagaagcaga acgacttgaa
     1381 aaggagcgtc gagctgctga agaggcaaag tctgccatag caaaacaagc tgccgaccag
     1441 atgaagaatc aggagcagct agcagcagaa cttgctgaat tcactgccaa gattgcactt
     1501 ctagaggaag ccaagaagaa aaaggaagag gaagctactg agtggcaaca caaagctttt
     1561 gcagcccagg aagacttgga aaagaccaaa gaagagttaa aaactgtgat gtctgccccc
     1621 cctccacctc caccaccacc agtcattcct ccaacagaaa acgaacatga tgaacacgat
     1681 gagaataatg ctgaagctag tgctgaatta tcaaatgaag gggtaatgaa ccatagaagc
     1741 gaggaagaac gtgtaaccga aacacagaaa aatgagcgtg ttaagaagca acttcaggca
     1801 ttaagttcag aattagccca agccagagat gaaaccaaga aaacacaaaa tgatgttctt
     1861 catgctgaga atgttaaagc aggccgtgat aagtacaaga ctctgcgaca gattcgacaa
     1921 ggcaatacaa agcagcgtat cgatgagttt gaagcaatgt gagagctgtt attttgcata
     1981 tatgttcttc ataagctgaa ccaccaacag agaaaagcag gcctttgcag atatgatgga
     2041 atgcatccca ccttgccaaa gcacttacac cagtttgact gtgctagcta aaagacaaat
     2101 ttaaggggag ctcttcaaca ttaaggcagt atgatatcat gcttggtttt cttttttctt
     2161 ttggtccagg gaatggagaa tggtgttcca ttgcctcttt tcacattttt tttctttttc
     2221 tttttttttt ctgttgaaga ttaacactaa ttatcacgtc tgacaaatgt gtatgtgtgg
     2281 tttcagttct gtgtacattt taaaggataa tggtgaacat tttaatgggt ttcccttgcc
     2341 ctttccatat ttaacctatt tccacattct ctctcactca cattttctca gtgtgccctt
     2401 ctcttatctg ccgtgtccat agccataatt ccaccatcat acagatcagg cagtgtttaa
     2461 aatgatggta ggtagcacag tggacagtct ttgatcatca tgtagaatat ggctatgaat
     2521 caggaaagag attagaacat ttaataatgt atgtacagct ggtgcttagt ttttttttaa
     2581 tctaaattta attaccttat tggatatttg atatttggtt atttaatcac agtcatcttt
     2641 aacagcttac actgattggt gttttatctc ctgtgatcct ttgatggctt tttttgccta
     2701 ccatttcaca gaggtttaga cagcagtagt agctccctag gagagtttac tgatgaaaca
     2761 gcctctgcaa gattttaaaa gttttgttct tttatagact gatttagaaa aacaaatgat
     2821 tagttaaaaa aagaaaatat acatttgttg gtaactaatg ttatttttta aaacctggac
     2881 ctttctggaa gggcagcata taaaaacatc agtcccgagg aggggacaac aatactacct
     2941 cactactaca tctgtgatga ctggttgttc aaacacaatg gagtgtgtaa ggtatatgtt
     3001 ttataattca taaccatagc ctcgatcatc aagaaatact ttcgaaattt cattttcctt
     3061 cagaatatct taagagtgct aaatttttaa ctgccttttt gtcgagtcaa actgtgggat
     3121 tctgatttgt attaaaattg taagctcctc actggtatac tatcatcctg gaggggtgtt
     3181 gtatggctga gcaagagaga gagagaatga gagagagact gtgtgtgtgt gtgtgtgtgt
     3241 gtgtactctg tgtgtgtatg agagagagag agaaatgcta accttgtagc atgtgaagaa
     3301 tgtctgtacc ttgatacgat agttacataa tcagtatatt tggtttctag atcactgtgc
     3361 ttattttgtt tcaatctctg actaaaaata cttaaatttg gtttgttaat tcttatttta
     3421 gaaattataa ttttagttta tattaatttc ggttatagct tactgaagaa atctttccag
     3481 ttagaaggag gttctaatat tcacatgttc taatactttg tttattgtaa aacagctaaa
     3541 tttggagata cgtaaagcct tgttttctct gtgtggttca gctactttcc atttggtatt
     3601 acacagtcaa atttacattt atctattaaa attgccattt tattaaacat tttcatgcac
     3661 agtagattca agttgtgtct gaaaatatct cttgtgcttt tttgattttg ctgactttaa
     3721 aaggattaat ctgggcagac attatgtaaa agaaaggttg cgtttaatat attttttgaa
     3781 ctttgtagga caaaacatag ctggttaacc ttgaagtgac tgttgtacca tggttgtgca
     3841 catgcttcag aatcctatgg aagagaatat tcctacttgc agtacatcaa aggaatggat
     3901 ggtggaccct actattcatg ttttgagaca taaatgttca ctttaaagca attgcataat
     3961 agataaaaac ctgaactttc attggatttt tgttaatttt cctcattttg aattatgtgc
     4021 actaccatag ctacatcagt ttgatacagt attgaaaaat tatcagttat attttgctgt
     4081 ttatgatcta tttgtagatt aggattaaaa tggatttaat ccatttttaa ggctgtgtga
     4141 atttttctaa acaagaacca tttgcaatat ggatttctta gagattaaac caattataac
     4201 ttattagcag tcgcgagcac atgttcatat agtcaatgta aaaatacact aatgagtatt
     4261 tggtaaatcc cagtaggctt ttaccattag cataattttg tgttgtacaa ttaagttaca
     4321 attacatctc taattttgga taatattcat tggttaacaa taaagtgaca aaagctcaaa
     4381 aaaaaaaaaa aaaaagaaaa aaaaaaaaaa aa
//