LOCUS BC047075 2319 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens janus kinase and microtubule interacting protein 1,
mRNA (cDNA clone MGC:48339 IMAGE:5314069), complete cds.
ACCESSION BC047075
VERSION BC047075.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2319)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2319)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852162.
FEATURES Location/Qualifiers
source 1..2319
/db_xref="H-InvDB:HIT000053082"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48339 IMAGE:5314069"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2319
/gene="JAKMIP1"
/gene_synonym="FLJ31564"
/gene_synonym="Gababrbp"
/gene_synonym="JAMIP1"
/gene_synonym="MARLIN1"
/db_xref="GeneID:152789"
/db_xref="HGNC:HGNC:26460"
CDS 207..2087
/gene="JAKMIP1"
/gene_synonym="FLJ31564"
/gene_synonym="Gababrbp"
/gene_synonym="JAMIP1"
/gene_synonym="MARLIN1"
/codon_start=1
/product="janus kinase and microtubule interacting protein
1"
/protein_id="AAH47075.1"
/db_xref="GeneID:152789"
/db_xref="HGNC:HGNC:26460"
/translation="MSKKGRSKGEKPEMETDAVQMANEELRAKLTSIQIEFQQEKSKV
GKLRERLQEAKLEREQEQRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAART
AKIKEGELQRLQATLNVLRDGAADKVKTALLTEAREEARRAFDGERLRLQQEILELKA
ARNQAEEALSNCMQADKTKAADLRAAYQAHQDEVHRIKRECERDIRRLMDEIKGKDRV
ILALEKELGVQAGQTQKLLLQKEALDEQLVQVKEAERHHSSPKRELPPGIGDMVELMG
VQDQHMDERDVRRFQLKIAELNSVIRKLEDRNTLLADERNELLKRSRETEVQLKPLVE
KNKRMNKKNEDLLQSIQRMEEKIKNLTRENVEMKEKLSAQASLKRHTSLNDLSLTRDE
QEIEFLRLQVLEQQHVIDDLSLERERLLRSKRHRGKSLKPPKKHVVETFFGFDEESVD
SETLSETSYNTDRTDRTPATPEEDLDDATAREEADLRFCQLTREYQALQRAYALLQEQ
VGGTLDAEREARTREQLQADLLRCQAKIEDLEKLLVEKGQDSKWVEEKQLLIRTNQDL
LEKIYRLEMEENQLKNEMQDAKDQNELLEFRVLELEVRDSICCKLSNGADILFEPKLK
FM"
BASE COUNT 632 a 544 c 737 g 406 t
ORIGIN
1 gggggctgcg ctcgctacgt ccgctgctgc tgcccggctc gggcctgagc gccgagcagg
61 atcccaagtg atggtggttt cctcggaggg cgagctgagt actgcgcgac tggttagcac
121 ggtggagctg gtagccacgc ctgctggctg gcgtgcgtga acaggtgtgg accgcaggat
181 ctcagcactc tgacccaagg ggaagcatgt cgaagaaagg ccggagcaag ggcgagaagc
241 ccgagatgga gacggacgcg gtgcagatgg ccaacgagga gctgcgggcc aagctgacca
301 gcattcagat cgagttccag caggaaaaaa gcaaggtggg caaactgcgc gagcggctgc
361 aggaggcgaa gctggagcgc gagcaggagc agcgacggca cacggcctac atttcggagc
421 tcaaggccaa gctgcatgag gagaagacca aggagctgca ggcgctgcgc gaggggctca
481 tccggcagca cgagcaggag gcggcgcgca ccgccaagat caaggagggc gagctgcagc
541 ggctacaggc cacgctgaac gtgctgcgcg acggcgcggc cgacaaggtc aagacggcgc
601 tgctgaccga ggcgcgcgag gaggcgcgca gggccttcga tggagagcgc ctgcggctgc
661 agcaggagat cctggagctc aaggcagcgc gcaatcaggc agaggaggcg ctcagtaact
721 gcatgcaggc cgacaagacc aaggcagccg acctgcgtgc cgcctaccag gcgcaccaag
781 acgaggtgca ccgcatcaag cgcgagtgcg agcgcgacat ccgcaggctg atggatgaga
841 tcaaagggaa agaccgtgtg attctggcct tggagaagga acttggcgtg caggctgggc
901 agacccagaa gctgcttctg cagaaagagg ctttggatga gcagctggtt caggtcaagg
961 aggccgagcg gcaccacagt agtccaaaga gagagctccc gcccgggatc ggggacatgg
1021 tggagctcat gggcgtccag gatcaacata tggacgagcg agatgtgagg cgatttcaac
1081 taaaaattgc tgaactgaat tcagtgatac ggaagctgga agacagaaat acgctgttgg
1141 cagatgagag gaatgaactg ctgaaacgct cacgagagac cgaggttcag ctgaagcccc
1201 tggtggagaa gaacaagcgg atgaacaaga agaatgagga tctgttgcag agtatccaga
1261 ggatggagga gaaaatcaag aacctcacgc gggaaaacgt ggaaatgaaa gaaaagctgt
1321 cagcgcaggc gtctctgaag cggcatacct ccttgaatga cctcagcctg acgagggatg
1381 agcaggagat cgagttcctg aggctgcagg tgctggagca gcagcacgtc attgacgacc
1441 tctcactgga gagagaacgg ctgttgcgct ccaaaaggca tcgagggaaa agtctgaaac
1501 cgcccaagaa gcatgttgtg gagacatttt ttggatttga tgaggagtct gtggactcag
1561 aaacgttgtc cgaaacatcc tacaacacag acaggacaga caggacccca gccacgcccg
1621 aagaagactt ggacgatgcc acagcccgag aggaggctga cctgcgcttc tgccagctga
1681 cccgggagta ccaggccctg caacgcgcct acgccctgct ccaggagcag gtgggaggca
1741 cgctggacgc tgagagggag gcccggactc gggagcagct acaagctgat ctgctgaggt
1801 gtcaggccaa aatcgaagat ttggagaagt tactggttga gaagggacag gattccaagt
1861 gggttgaaga gaagcagctg ctcatcagaa caaaccaaga cttgctggaa aagatttaca
1921 gactggaaat ggaagagaac cagctgaaga atgaaatgca agacgccaag gatcagaacg
1981 agctgttaga attcagagtg ctagaactcg aagtaagaga ctctatctgt tgtaaactct
2041 caaacggagc agacattctc tttgaaccca aactgaaatt catgtaaagc tctcagatgt
2101 tttcaagcat gtgtaaaggg gacatgttat agtttctttc tttctttctt tctttttttt
2161 tttaaatctg tatgttcaga ataatttcac tgccttaatg tgttctggag agcgtgctca
2221 cccaagtcta tggacatgta ccagagctaa tatatttatt gcctatggct tgttttgcac
2281 ttaataaaat aatttgtttt tacaaaaaaa aaaaaaaaa
//