LOCUS BC047071 2632 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens BTB (POZ) domain containing 7, mRNA (cDNA clone
IMAGE:5267139), complete cds.
ACCESSION BC047071
VERSION BC047071.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2632)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2632)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: a Column: 2
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2632
/db_xref="H-InvDB:HIT000053080"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5267139"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2632
/gene="BTBD7"
/gene_synonym="FUP1"
/gene_synonym="MGC48310"
/db_xref="GeneID:55727"
/db_xref="HGNC:HGNC:18269"
CDS 377..1609
/gene="BTBD7"
/gene_synonym="FUP1"
/gene_synonym="MGC48310"
/codon_start=1
/product="BTB (POZ) domain containing 7"
/protein_id="AAH47071.1"
/db_xref="GeneID:55727"
/db_xref="HGNC:HGNC:18269"
/translation="MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLY
SLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALV
EEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAIL
AARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVD
ILVQLSEEFGTPNSLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKA
HKAVISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYATVILHCMYT
DVVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQEETTV
IRPACAAELSNSCLLPQS"
BASE COUNT 862 a 507 c 646 g 617 t
ORIGIN
1 ggccggctcc gcagcgccgc gcaggcgccc cagggccacg ccgaaccgag cccctcctgc
61 tccgtctagg agtcaaaatg gcggcgaggg gaacctggag cagtcccgga gcctgagcca
121 ctgacaggag aggagagggc ggcggcggcg gtgggaggag gatggccggg ggtgctggcg
181 ccggtgcgga cggcggtgct ggtggcggcg gcggcggagg cgacggcagc ggtcccagcg
241 gcagcagcag cggcgggagg agcctccggg aaatggatga aaagaggctg ctggatccag
301 ggttgaaggt tcataaaggc ctctgggatt atactctgaa gaacccgcag acggaatgcc
361 tgagtgactg aagaaaatgg gtgctaatgc atctaattat cctcattcat gttccccgag
421 ggtaggggga aattcacagg cccaacagac ttttataggg acctcatcct attctcagca
481 aggctatggt tgcgaatcaa agttgtatag ccttgaccat ggccatgaga aaccacaaga
541 caaaaaaaag agaacctctg gtcttgccac cctcaaaaag aagtttatta agcgtcggaa
601 atctaatagg tctgccgatc atgccaagca gatgcgagaa ctcctctctg ggtgggatgt
661 tagagatgtc aatgcattag tggaggaata tgagggaaca tcagcattaa aggagctttc
721 tctacaagcc agtttggcta gaccagaagc ccggacattg cagaaagata tggctgatct
781 ttatgagtac aagtattgta ctgatgtaga cttaatattt caagaaactt gttttcctgt
841 tcatcgtgcc attttggcag caaggtgtcc attttttaaa acactgcttt cttcctcacc
901 agagtatggg gcagagataa taatggacat caatacagct ggtattgata tgcccatgtt
961 ttctgctttg ttacactacc tttatacagg agagtttgga atggaggact caaggtttca
1021 aaatgtcgat atccttgttc agcttagtga agaatttgga acaccaaatt cccttgatgt
1081 agatatgcgt ggactctttg attacatgtg ttattatgat gtcgtcctta gtttttcttc
1141 agactctgaa ctggttgaag cttttggtgg aaatcagaac tgtttagatg aagagctcaa
1201 agcccacaag gctgttattt ctgcacggtc cccatttttt cgaaatttat tacaaaggag
1261 gatacgaact ggtgaagaaa tcacagaccg aactttgagg actcccacaa gaattatatt
1321 agatgagtcc attataccaa aaaaatatgc aacagtgata ttacactgta tgtataccga
1381 cgtggtggac ctctctgttt tgcactgtag cccctctgtg gggagtctca gtgaagttca
1441 ggctctcgtc gcagggaagc caaacatgac cagggcagaa gaagccatgg aactttacca
1501 catagcactg ttcttggaat ttaacatgct tgcacaagag gagactacag tcatcaggcc
1561 tgcctgtgca gcagagcttt caaacagctg cttactgcct caatcttaaa tatgaaaacc
1621 catccaagga taactggaca tttgaggaaa gcttccaaat tgagacagag atcagagcaa
1681 aaagaacaaa gtcctggagg aagcagacaa tgaagggagc agaagaaaac ttcagtagaa
1741 tcaaaatatc cttatataaa agaacttttt atggaatcag tgagacataa gcaggatgct
1801 attaaagtaa aaacaggagc ttttagaaat aagatagcag aaatgaaaga tataatggaa
1861 gcattgaaag gtacagttga ggaaatctag aaagtaaata atataataaa gagatgagtg
1921 gagacaaata aaactagagt attcatccag ggtctaacat ctaacaaata gtggctttag
1981 aaatatatac cagagaaaag tgaagagaag acagtatcta aggagtaata taagaaatat
2041 ttccaaaact aaaggaattt ctatataaaa agtttctttt tcagaacact ggggaaaaag
2101 agacaatttt aaaatgttgc agggaggaga aaaattaggt tccatgcaaa gaaataggaa
2161 tcagatggta ttgagatttt cagtagcaac aactgaatac cacaatacag tgaagtagtg
2221 tcttccaaaa gctgatggaa aattatttta aacacaaaat cctatattta gccaaacagt
2281 caatcaagtg taaggctaaa taaaggcatt tttcagtcat acctcgaaaa actgcctgtg
2341 tagggatatt tcccctgctt ccccactcag gcagctgctg ggaatgtatt ccaccaaatg
2401 acgaagcaaa ccaagaacaa agaagtgaag gatctagaaa atgggctcca acacgggaag
2461 gaagcaaagg gagatcccac gcatcagcca cacagtaggt cttgtgggca ttcagtctag
2521 cccagaccgg gagggtgaaa gtctccaagg aaagaggtgt ctcggaagaa atcaattact
2581 ttcaatgttt gaacattaaa tagcaaatga caaagcaaaa aaaaaaaaaa aa
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