LOCUS       BC047003                1619 bp    mRNA    linear   HUM 30-JAN-2008
DEFINITION  Homo sapiens jumonji domain containing 6, mRNA (cDNA clone
            IMAGE:3913852).
ACCESSION   BC047003
VERSION     BC047003.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1619)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 93 Row: a Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23943859.
FEATURES             Location/Qualifiers
     source          1..1619
                     /db_xref="H-InvDB:HIT000098407"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3913852"
                     /tissue_type="Uterus, leiomyosarcoma"
                     /clone_lib="NIH_MGC_71"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..1619
                     /gene="JMJD6"
                     /gene_synonym="PSR"
                     /gene_synonym="PTDSR1"
                     /db_xref="GeneID:23210"
                     /db_xref="HGNC:HGNC:19355"
                     /db_xref="MIM:604914"
     CDS             <1..1327
                     /gene="JMJD6"
                     /gene_synonym="PSR"
                     /gene_synonym="PTDSR1"
                     /codon_start=2
                     /product="jumonji domain containing 6"
                     /protein_id="AAH47003.1"
                     /db_xref="GeneID:23210"
                     /db_xref="HGNC:HGNC:19355"
                     /db_xref="MIM:604914"
                     /translation="AKGVWVLPSPPPRPGRGALVSGSGLRRGRSGTSWRPRRMNHKSK
                     KRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFVERYE
                     RPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYME
                     STRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPP
                     RSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNV
                     IYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV
                     VWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQESTGIASDSSSDSSSSSSSSS
                     SDSDSECESGSEGDGTVHRRKKRRTCSMVGNGDTTSQDDCVSKERSSSR"
BASE COUNT          434 a          406 c          462 g          317 t
ORIGIN      
        1 agcgaagggc gtttgggtac tgccgtcgcc gccgcccagg ccggggaggg gtgcgttagt
       61 gtcaggaagc gggctgcgcc gaggtcgtag cggaaccagc tggcgacccc gcagaatgaa
      121 ccacaagagc aagaagcgca tccgcgaggc caagcggagt gcgcggccgg agctcaagga
      181 ctcgctggat tggacccggc acaactacta cgagagcttc tcgctgagcc cggcggccgt
      241 ggcggataac gtggaaaggg cagatgcttt acagctgtct gtggaagaat ttgtggagcg
      301 gtatgaaaga ccttacaagc ccgtggtttt gttgaatgcg caagagggct ggtctgcgca
      361 ggagaaatgg actctggagc gcctaaaaag gaaatatcgg aaccagaagt tcaagtgtgg
      421 tgaggataac gatggctact cagtgaagat gaagatgaaa tactacatcg agtacatgga
      481 gagcactcga gatgatagtc ccctttacat ctttgacagc agctatggtg aacaccctaa
      541 aagaaggaaa cttttggaag actacaaggt gccaaagttt ttcactgatg accttttcca
      601 gtatgctggg gagaagcgca ggccccctta caggtggttt gtgatggggc caccacgctc
      661 cggaactggg attcacatcg accctctggg aaccagtgcc tggaatgcct tagttcaggg
      721 ccacaagcgc tggtgcctgt ttcctaccag cactcccagg gaactcatca aagtgacccg
      781 agacgaagga gggaaccagc aagacgaagc tattacctgg tttaatgtta tttatccccg
      841 gacacagctt ccaacctggc cacctgaatt caaacccctg gaaatcttac aaaaaccagg
      901 agagactgtc tttgtaccag gaggctggtg gcatgttgtc ctcaatctcg acactactat
      961 cgccatcacc caaaattttg ccagcagcac caacttccct gtggtatggc acaagacggt
     1021 aagagggaga ccaaagttat caaggaaatg gtataggatt ttgaagcaag agcaccccga
     1081 gttggcagtc ctcgcagact cggttgacct tcaggagtcc acagggatag cttccgacag
     1141 ctccagcgac tcttccagct cctccagctc cagttcgtca gactccgact cagagtgcga
     1201 gtctggatcc gagggcgatg ggacagtgca ccgcaggaag aagaggagga cgtgcagcat
     1261 ggtgggaaac ggggacacca cctcccagga cgactgtgtc agcaaagagc gcagctcctc
     1321 caggtgaccc agcaaggctg ttgtctgtat ggaaggacac gctcgcggca agggcagggc
     1381 ctggggaggg tggcctgtcc agtcctgcag acaaggggag gcctgacaga gcccaagaat
     1441 gaggacaccc tcggcacggg aacccattca cttagcgttt gctccagtag ctttccctct
     1501 gctaccaatg cagataaacg cggcttgttt tactcaggca agagaatgtg aatagtgcca
     1561 agaaaatcct ttacattatt taataaaaat tgaatccatt ttcaaaaaaa aaaaaaaaa
//