LOCUS BC047003 1619 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens jumonji domain containing 6, mRNA (cDNA clone IMAGE:3913852). ACCESSION BC047003 VERSION BC047003.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1619) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1619) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: a Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23943859. FEATURES Location/Qualifiers source 1..1619 /db_xref="H-InvDB:HIT000098407" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3913852" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1619 /gene="JMJD6" /gene_synonym="PSR" /gene_synonym="PTDSR1" /db_xref="GeneID:23210" /db_xref="HGNC:HGNC:19355" /db_xref="MIM:604914" CDS <1..1327 /gene="JMJD6" /gene_synonym="PSR" /gene_synonym="PTDSR1" /codon_start=2 /product="jumonji domain containing 6" /protein_id="AAH47003.1" /db_xref="GeneID:23210" /db_xref="HGNC:HGNC:19355" /db_xref="MIM:604914" /translation="AKGVWVLPSPPPRPGRGALVSGSGLRRGRSGTSWRPRRMNHKSK KRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFVERYE RPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYME STRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPP RSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNV IYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV VWHKTVRGRPKLSRKWYRILKQEHPELAVLADSVDLQESTGIASDSSSDSSSSSSSSS SDSDSECESGSEGDGTVHRRKKRRTCSMVGNGDTTSQDDCVSKERSSSR" BASE COUNT 434 a 406 c 462 g 317 t ORIGIN 1 agcgaagggc gtttgggtac tgccgtcgcc gccgcccagg ccggggaggg gtgcgttagt 61 gtcaggaagc gggctgcgcc gaggtcgtag cggaaccagc tggcgacccc gcagaatgaa 121 ccacaagagc aagaagcgca tccgcgaggc caagcggagt gcgcggccgg agctcaagga 181 ctcgctggat tggacccggc acaactacta cgagagcttc tcgctgagcc cggcggccgt 241 ggcggataac gtggaaaggg cagatgcttt acagctgtct gtggaagaat ttgtggagcg 301 gtatgaaaga ccttacaagc ccgtggtttt gttgaatgcg caagagggct ggtctgcgca 361 ggagaaatgg actctggagc gcctaaaaag gaaatatcgg aaccagaagt tcaagtgtgg 421 tgaggataac gatggctact cagtgaagat gaagatgaaa tactacatcg agtacatgga 481 gagcactcga gatgatagtc ccctttacat ctttgacagc agctatggtg aacaccctaa 541 aagaaggaaa cttttggaag actacaaggt gccaaagttt ttcactgatg accttttcca 601 gtatgctggg gagaagcgca ggccccctta caggtggttt gtgatggggc caccacgctc 661 cggaactggg attcacatcg accctctggg aaccagtgcc tggaatgcct tagttcaggg 721 ccacaagcgc tggtgcctgt ttcctaccag cactcccagg gaactcatca aagtgacccg 781 agacgaagga gggaaccagc aagacgaagc tattacctgg tttaatgtta tttatccccg 841 gacacagctt ccaacctggc cacctgaatt caaacccctg gaaatcttac aaaaaccagg 901 agagactgtc tttgtaccag gaggctggtg gcatgttgtc ctcaatctcg acactactat 961 cgccatcacc caaaattttg ccagcagcac caacttccct gtggtatggc acaagacggt 1021 aagagggaga ccaaagttat caaggaaatg gtataggatt ttgaagcaag agcaccccga 1081 gttggcagtc ctcgcagact cggttgacct tcaggagtcc acagggatag cttccgacag 1141 ctccagcgac tcttccagct cctccagctc cagttcgtca gactccgact cagagtgcga 1201 gtctggatcc gagggcgatg ggacagtgca ccgcaggaag aagaggagga cgtgcagcat 1261 ggtgggaaac ggggacacca cctcccagga cgactgtgtc agcaaagagc gcagctcctc 1321 caggtgaccc agcaaggctg ttgtctgtat ggaaggacac gctcgcggca agggcagggc 1381 ctggggaggg tggcctgtcc agtcctgcag acaaggggag gcctgacaga gcccaagaat 1441 gaggacaccc tcggcacggg aacccattca cttagcgttt gctccagtag ctttccctct 1501 gctaccaatg cagataaacg cggcttgttt tactcaggca agagaatgtg aatagtgcca 1561 agaaaatcct ttacattatt taataaaaat tgaatccatt ttcaaaaaaa aaaaaaaaa //