LOCUS BC046999 2864 bp mRNA linear HUM 26-MAR-2019
DEFINITION Homo sapiens syntaxin 12, mRNA (cDNA clone MGC:51957
IMAGE:3851266), complete cds.
ACCESSION BC046999
VERSION BC046999.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2864)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 2864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2019) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Mar 26, 2019 this sequence version replaced BC046999.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28933464.
FEATURES Location/Qualifiers
source 1..2864
/db_xref="H-InvDB:HIT000053057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51957 IMAGE:3851266"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2864
/gene="STX12"
/gene_synonym="MGC51957"
/gene_synonym="STX13"
/gene_synonym="STX14"
/db_xref="GeneID:23673"
/db_xref="HGNC:HGNC:11430"
/db_xref="MIM:606892"
CDS 37..867
/gene="STX12"
/gene_synonym="MGC51957"
/gene_synonym="STX13"
/gene_synonym="STX14"
/codon_start=1
/product="syntaxin 12"
/protein_id="AAH46999.1"
/db_xref="GeneID:23673"
/db_xref="HGNC:HGNC:11430"
/db_xref="MIM:606892"
/translation="MSYGPLDMYRNPGPSGPQLRDFSSIIQTCSGNIQRISQATAQIK
NLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQ
KERLMNDFSAALNNFQAVQRRVSEKEKESIARARAGSRLSAEERQREEQLVSFDSHEE
WNQMQSQEDEVAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDS
IEANVESSEVHVERATEQLQRAAYYQKKSRKKMCILVLVLSVIILILGLIIWLVYKTK
"
BASE COUNT 875 a 524 c 606 g 859 t
ORIGIN
1 gagcggtgta gagcgagcag gtctcagctc ctcgtcatgt catacggtcc cttagacatg
61 taccggaacc cggggccctc ggggccccag ctccgggact tcagcagcat catccagacg
121 tgcagcggca acatccagcg gatcagccaa gccactgctc agataaagaa tttgatgagc
181 cagctaggaa ctaagcagga ctcaagcaag ctacaggaaa atctgcaaca gttacaacac
241 tccacaaatc agctcgccaa ggaaacaaat gaattgctga aagaattagg gtccttgccc
301 cttcccttat ctacttcaga acagcgccag cagagacttc agaaggaacg cctcatgaat
361 gacttctctg cagccttaaa caatttccag gctgtgcaga gaagggtatc tgaaaaggaa
421 aaggagagta ttgccagagc aagagctgga tctcgtcttt ctgcagaaga gaggcaaaga
481 gaggagcagc tggtctcatt tgacagccat gaggagtgga accagatgca gagccaggag
541 gatgaggtgg ccatcactga gcaggatttg gaacttatta aagaaagaga aacggcaatt
601 cggcagctgg aggctgacat tttggatgtc aatcagatat ttaaagattt ggccatgatg
661 atccatgacc agggtgatct gattgatagc atagaagcca atgtggaaag ctcagaggtg
721 cacgtcgaaa gagccactga acagttacag cgagctgctt actatcagaa aaaatctcgc
781 aagaagatgt gtatcctggt gcttgtcctg tcagtgatta ttctaatctt gggacttatt
841 atctggctag tttataaaac gaagtgattg cctccgatcg ttctcccgct gagctgtttt
901 caagggcaag tgcttgttga agtcttgcca gaacaaactg atcacaagaa gacagcatat
961 atcagaacgt cctgtaatca tttagttaga aactaactac taactagtct ttggaattcg
1021 tgacctatgg agacagtaat tatcaattta ttgattctat tgatttctca aattaggaat
1081 taacttatgt ggattttgct tcctcttgta ttctgattgc ccttcatccc aagtgtttac
1141 tgaaaattcc attctagata ttcttgtttt gacaaatgac actacagtct cgtaatattg
1201 tcttttatgt atatacaaaa tttacctttt tactagcatc tgagatagag ttactttctg
1261 gtacccagta tattggagtc tgtcagaaac tctataatag gccaccagtt tttattattt
1321 aacattttta tttgaatttc taagaagcct attctctatc tattttgaaa gattttggca
1381 ctatatttaa ttggaaggta aaatattgta catgtgatcc agagtaaatg agaagtctct
1441 atctgagctg gtcagttact ggagtacatg ttactaatct gggtttaaag tttacttcat
1501 tatctgctag tgtcatccac agcagttcat cctcatccac actaagccat cctgttagct
1561 tttaaaggaa gttaatttaa ttaacattaa tatactctat gggctccctc tcccacctgt
1621 ctgcatagaa aggcagaatt agacatagca tgctttggaa aagcaaatag gaattgttgg
1681 gaatgattta atcttgttgt tgttgttgtt gttgttcact tgtggttcta cattcctggt
1741 gaatgatgaa tgttgctgtc aaagggctgc cccctacctt ataagggttg ctgggcattt
1801 gaaggcagga agatttttaa agatagattg aggttggttt aaaattattc ctgtaaacca
1861 acaataaagc aaagaagagg ttcatttttg taaataacac tggtttcaaa tagtgatgtt
1921 agacttaacc taatttataa acaagagatt aatatctcca tgcatagttt tagacaaaaa
1981 aagatgtttc aataaaatta ctgtcttgta atataaatgt tgtccacttc ccttttccac
2041 aggcctagaa cagttaaagg gaacataatt tgtttaggct cccacataaa tgtgaatctg
2101 gccaacaact ttggttcatc ctttagtgaa ttagaggatt tggctaccct gagtatattt
2161 atattcattt cttctgttct ccttctgtta ttatacttaa tcttctaaac taaactaatg
2221 tgaacagtag ggaagcaagg gcccaaatgc ataagtttct ttgcactgtt gcacttactt
2281 aatacaaata aatgtttttt aaagcttttg tagtatgttt ttatgagtta acatcctaat
2341 gtggtaggta ttaggtaatg tgctgtcatg agaaaaattg agacttccaa gaaaactgga
2401 caccaggtga gggttggttt ggagacggaa taggtgtagc tgcctttcct tgaaaaacag
2461 tgtgtagaga tggctgagtg caatggctca cacttgtaat cccaacactt tggaaggctg
2521 aggcgggagg atcagtatat cggtacgtct gagcccaaga gttcaagatc agcctgggca
2581 gtatagcaag accccatctc catttttttt ttaatgattt tttaattaaa aaaaagaaca
2641 acaggataga gctgttgggg tggcacagtg gcccaaagag cagcttcaga gataattcct
2701 tggttctatg atccctgttt aactccaaat tacagtcgga cttggataca tcatttgtaa
2761 cattgtagga aagaaaaaag tcttggttgt gaaaaacgat ttgcatttgg gtaaaataaa
2821 gtgaccatgc ttttgttctg taaaaaaaaa aaaaaaaaaa aaaa
//