LOCUS BC046520 2884 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens sorting nexin 14, mRNA (cDNA clone IMAGE:5267454),
partial cds.
ACCESSION BC046520
VERSION BC046520.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2884)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2884)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC046520.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: a Column: 6.
FEATURES Location/Qualifiers
source 1..2884
/db_xref="H-InvDB:HIT000098380"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5267454"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2884
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/db_xref="GeneID:57231"
CDS <1..2707
/gene="SNX14"
/gene_synonym="MGC13217"
/gene_synonym="RGS-PX2"
/codon_start=2
/product="SNX14 protein"
/protein_id="AAH46520.1"
/db_xref="GeneID:57231"
/translation="CLSAASLLLNRYIHILMIFWSFVAGVVTFYCSLGPDSLLPNIFF
TIKYKPKQLGLQELFPQGHSCAVCGKVKCKRHRPSLLLENYQPWLDLKISSKVDASLS
EVLELVLENFVYPWYRDVTDDESFVDELRITLRFFASVLIRRIHKVDIPSIITKKLLK
AAMKHIEVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTELLFPY
ILPPKATDCRSLTLLIREILSGSVFLPSLDFLADPDTVNHLLIIFIDDSPPEKATEPA
SPLVPFLQKIAEPRNKKPSVLKLELKQIREQQDPLFRFMNFLKQEGAVHVLQFCLTVE
EFNDRILRPELSNDEMLSLHEELQKIYKTYCLDESIDKIRFDPFIVEEIQRIAEGPYI
DVVKLQTMRCLFEAYEHVLSLLENVFTPMFCHSDEYFRQLLRGAESPTRNSKLNRNTQ
KRGESFGISRIGSKIKGVFKSTTMEGAMLPNYGVAEGEDDFIEEGIVVMEDDSPVEAV
STPNTPRNLAAWKISIPYVDFFEDPSSERKEKKERIPVFCIDVERNDRRAVGHEPEHW
SVYRRYLEFYVLESKLTEFHGAFPDAQLPSKRIIGPKNYEFLKSKREEFQEYLQKLLQ
HPELSNSQLLADFLSPNGGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQHLEPFIMN
FINSCESPKPKPSRPELTILSPTSENNKKLFNDLFKNNANRAENTERKQNQNYFMEVM
TVEGVYDYLMYVGRVVFQVPDWLHHLLMGTRILFKNTLEMYTDYYLQCKLEQLFQEHR
LVSLITLLRDAIFCENTEPRSLQDKQKGAKQTFEEMMNCIPDLLVKCIGEETKYESIR
LLFDGLQQPVLNKQLTYVLLDIVIQELFPELNKVQKEVTSVTSWM"
BASE COUNT 942 a 499 c 564 g 879 t
ORIGIN
1 ctgtctcagc gccgcctccc tgcttcttaa caggtatatt catattttaa tgatcttctg
61 gtcatttgtt gctggagttg tcacattcta ctgctcacta ggacctgatt ctctcttacc
121 aaatatattc ttcacaataa aatacaaacc caagcagtta ggacttcagg aattatttcc
181 tcaaggtcat agctgtgctg tttgtggtaa agtgaaatgt aaacgacata ggccttcttt
241 gctacttgaa aactaccagc catggctaga cctgaaaatt tcttccaagg ttgatgcatc
301 tctctcagag gttcttgaat tagtgttgga aaactttgtt tatccgtggt acagggatgt
361 gacagatgat gaatcctttg ttgatgaact gagaataaca ttacgttttt ttgcatctgt
421 cttaataaga aggattcaca aggtggatat tccatctatt ataaccaaga aactattaaa
481 agcagcaatg aagcatatag aagtgatagt taaagccaga cagaaagtaa aaaatacaga
541 gtttttacag caagctgctt tagaagaata tggtccagag cttcatgttg ctttgagaag
601 tcgaagagat gaattgcact atttaaggaa acttactgaa ctgctttttc cttatatttt
661 gcctcctaaa gcaacagact gcagatctct gaccttactt ataagagaga ttctgtctgg
721 ctctgtgttc cttccttctt tggatttcct agctgatcca gatactgtga atcatttgct
781 tatcatcttc atagatgaca gtccacctga aaaagcaact gaaccggctt ctcctttggt
841 tccattcttg cagaaaattg cagaacctag aaataaaaag ccatctgtgc tgaagttaga
901 attgaagcaa atcagagagc aacaagatcc tttatttcgt tttatgaact ttctgaaaca
961 agaaggcgca gtgcacgtgt tgcagttttg tttgactgtg gaggaattta atgatagaat
1021 tttacgacca gaattatcaa atgatgaaat gctgtctctt catgaagaat tgcagaagat
1081 ttataaaaca tactgtttgg atgaaagtat tgacaaaatt agatttgatc ccttcattgt
1141 agaagagatt caaagaattg ctgaaggccc atacatagat gttgtgaaac ttcaaactat
1201 gagatgtctt tttgaagcat atgaacatgt tctttccctt ttggagaatg tatttactcc
1261 tatgttctgc catagtgatg agtatttcag acaactttta agaggtgcag aatcaccaac
1321 acgcaattca aaattgaaca ggaacacaca gaaaagggga gaatcatttg gaatcagcag
1381 aataggtagc aaaattaaag gagtattcaa aagtaccaca atggagggag ctatgttgcc
1441 taattatggt gtagctgaag gtgaagatga ttttattgaa gaaggtattg ttgtaatgga
1501 agatgattct ccagtggagg ctgtgagcac acctaatact cccagaaacc ttgctgcatg
1561 gaaaattagc attccatatg tagacttttt tgaggatccc tcctctgaaa ggaaggagaa
1621 aaaagaaaga attcctgtgt tttgtattga tgttgaaaga aatgatagga gagcagttgg
1681 acacgagcct gaacattggt ctgtctatag aagatatctt gaattctatg tacttgaatc
1741 aaaactaaca gaatttcatg gtgcatttcc tgatgcccag cttccttcta agaggatcat
1801 tggccccaaa aattatgaat tcttaaagtc aaagagggaa gagttccaag aatatctaca
1861 gaaacttctg cagcatccag aactgagtaa tagtcaactt ctggcagact ttctttcccc
1921 taatggtggg gaaacacaat ttcttgataa gatactacca gatgtaaatc ttgggaaaat
1981 tataaaatct gttcctggaa aactaatgaa agagaaaggt cagcatttgg aaccttttat
2041 catgaatttc attaattctt gtgagtctcc aaagcctaaa ccaagtagac cagaactgac
2101 cattctcagc cctacttcag aaaacaacaa gaagcttttc aatgatctgt ttaaaaataa
2161 tgcaaaccgt gctgaaaata cagagagaaa gcaaaatcag aattatttta tggaggtgat
2221 gactgtagaa ggagtctatg attacctgat gtatgtagga cgggtagttt tccaggttcc
2281 tgactggctt catcatctct taatgggaac tcgaatcctc tttaaaaaca ccctggaaat
2341 gtatactgat tactatcttc agtgtaaact agaacagcta tttcaggagc accgtttggt
2401 ctcactcata acacttctca gagatgctat attctgtgaa aacactgaac ctcgctctct
2461 ccaagataag caaaaaggag caaaacagac ttttgaagaa atgatgaatt gcattccaga
2521 tctgttagtc aagtgtattg gtgaagaaac caagtatgaa agcatcagac ttctgtttga
2581 tggcttacag caaccagtac tcaacaagca gctgacttat gttttattgg acattgtgat
2641 acaggaactg tttccagagc tcaataaggt acaaaaggaa gttacctctg tgacatcttg
2701 gatgtaaaca cttggatttg gtatagaata acccattgaa atttctgctg tgcgagggtg
2761 gtagaaattt acttttttgg gtatattctt atatatatta tgtacatcgc tgtctgaaat
2821 tttagttatt ttttgttttt aataaggact aacacaaact taatgattaa aaaaaaaaaa
2881 aaaa
//