LOCUS BC046460 2657 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens forkhead box J1, mRNA (cDNA clone MGC:35202
IMAGE:5171637), complete cds.
ACCESSION BC046460
VERSION BC046460.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2657)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2657)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: f Column: 6.
FEATURES Location/Qualifiers
source 1..2657
/db_xref="H-InvDB:HIT000053042"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35202 IMAGE:5171637"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2657
/gene="FOXJ1"
/gene_synonym="HFH-4"
/gene_synonym="HFH4"
/gene_synonym="MGC35202"
/db_xref="GeneID:2302"
/db_xref="HGNC:HGNC:3816"
/db_xref="MIM:602291"
CDS 347..1612
/gene="FOXJ1"
/gene_synonym="HFH-4"
/gene_synonym="HFH4"
/gene_synonym="MGC35202"
/codon_start=1
/product="forkhead box J1"
/protein_id="AAH46460.1"
/db_xref="GeneID:2302"
/db_xref="HGNC:HGNC:3816"
/db_xref="MIM:602291"
/translation="MAESWLRLSGAGPAEEAGPEGGLEEPDALDDSLTSLQWLQEFSI
LNAKAPALPPGGTDPHGYHQVPGSAAPGSPLAADPACLGQPHTPGKPTSSCTSRSAPP
GLQAPPPDDVDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRH
ADPTWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPV
HIHPAFARQAAQEPSAVPRAGPLTVNTEAQQLLREFEEATGEAGWGAGEGRLGHKRKQ
PLPKRVAKVPRPPSTLLPTPEEQGELEPLKGNFDWEAIFDAGTLGGELGALEALELSP
PLSPASHVDVDLTIHGRHIDCPATWGPSVEQAADSLDFDETFLATSFLQHPWDESGSG
CLPPEPLFEAGDATLASDLQDWASVGAFL"
BASE COUNT 523 a 881 c 856 g 397 t
ORIGIN
1 ctttggagcg gctacttaat gccggtcccg gggccgcggt agctcagaga agcgccgtcg
61 ggcggggggg cggcaagagg cgctggcagg gcccccgagc tgggggcaga gagccgcagg
121 gggtgggagc aacttcttcc agaaccttcc tctggcccgg gctgcgctct gagccaggca
181 ccacatactt attcggagga ggcgcccccg gggtcgcgag atggaagcgc gcgtccggga
241 ggccgtgtaa cgggagctgc gggactcagc gggccagaga gcgcggcggg ccacccccgg
301 ctcagcccgt ggatgctgac cgccccctcg gagagtcccc gcagacatgg cggagagctg
361 gctgcgcctc tcgggagccg ggccggcgga ggaggccggg ccggagggcg gcctggagga
421 gcccgacgcc ctggatgaca gcctgaccag cctgcagtgg ctgcaggaat tctccattct
481 caacgccaag gcccccgccc tgcccccggg gggcaccgac ccccacggct accaccaggt
541 gccaggttca gcggcgcccg ggtcccccct ggcggccgac cccgcctgcc tggggcagcc
601 acacacgccg ggcaagccca cgtcgtcgtg cacgtcgcgg agcgcgcccc cggggctgca
661 ggccccaccc cccgacgacg tggactacgc caccaatccg cacgtgaagc ctccctactc
721 gtatgccacg ctcatctgca tggccatgca ggccagcaag gccaccaaga tcaccctgtc
781 ggccatctac aagtggatca cggacaactt ctgctacttc cgccacgcag atcccacctg
841 gcagaattca atccgccaca acctgtctct gaacaagtgc ttcatcaaag tgcctcggga
901 gaaggacgaa ccaggcaagg ggggcttctg gcgcattgac ccccagtacg cggagcggct
961 actgagcggc gctttcaaga agcggcgact gccccctgtc cacatccacc cagcctttgc
1021 ccgccaggcc gcgcaggagc ccagcgctgt cccccgggcc gggccgctga cggtgaatac
1081 cgaggcccag cagctgctgc gggagttcga ggaggccacc ggggaggcgg gctggggtgc
1141 aggcgagggc aggctggggc ataagcgcaa acagccgctg cccaagcggg tggccaaggt
1201 cccgcggccc cccagcaccc tgctgcccac cccggaggag cagggtgagc tggaacccct
1261 caaaggcaac tttgactggg aggccatctt cgacgccggc actctgggcg gggagctggg
1321 tgcactggag gccctggagc tgagcccgcc tctgagcccc gcctcacacg tggacgtgga
1381 cctcaccatc cacggccgcc acatcgactg ccctgccacc tgggggcctt cggtggagca
1441 ggctgccgac agcctggact tcgatgagac cttcctggcc acatccttcc tgcagcaccc
1501 ctgggacgag agcggcagtg gctgcctgcc cccggagccc ctctttgagg ctggggatgc
1561 caccctggcc tccgacctgc aggactgggc cagcgtgggg gccttcttgt aagaggccag
1621 gccctgcccc acctctggac agtgcccaag tcagggtcca gaactgcccc ccaacacagg
1681 tccacagaca ccccaccacc taggcagggg ctgggccagg gctccaaggc ttgccccaga
1741 ggccacatgg ccaccagccc cagctgccat cagattcaag cccaggaggc tgaaaacgag
1801 ggcccaggac cagaatcgct gcctcctctc cccagcccca ccttgtacac acagtgtttc
1861 attgctccgc gtcttcccag ccccagaaac cggctaaagg accctgcacc atgagagccg
1921 aggcctggag gagcccgggt caggctgggg aggaacagaa ctgggccctc ccagagcacc
1981 tccgcttccc ccctgcttcc ccaggtctct atccagagag agtccccagg tacaacaaat
2041 gctaattaga tgacagcaaa ttaaccccct ggaggcttct cctggcagag cctccctggg
2101 gccggggcag gctgtggatg gggcggagca gggcagaaga tggactgggg gagggggcag
2161 agagaggaga ccaaaatgag gtggtggcac agggtggggc aaggagatcc tctctaaggc
2221 ctctggggtc tttgcctggc cccatcccta gggggcgggg aggggacgta aatccctaat
2281 ctttaagccc gacttgaggc tgagagcagc tggaagtttg ggtttggtgg tttgggggcc
2341 ggggcagcca agctgtatgg ggcaggacag acagactaat gtagtgagtg tagctgtagc
2401 tgaggcttaa ctgggaggga tgccgagctt gctggaacta ctgggaccaa gaagcggggt
2461 accccacgcc cctgcctgca ctcctcgggg gcgtggggcg tgccttgctc cacccggact
2521 ccctgggctg cgtcccacat ccaccctcct gccccgtggg gcaatttaac ctttttcatg
2581 aaagttattt acaatgaaaa gtttttaaaa ataaaatttt taaaaatcta aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaa
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