LOCUS BC046367 3975 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptotagmin IX, mRNA (cDNA clone MGC:50869 IMAGE:5770087), complete cds. ACCESSION BC046367 VERSION BC046367.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3975) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3975) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: j Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31342257. FEATURES Location/Qualifiers source 1..3975 /db_xref="H-InvDB:HIT000053038" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:50869 IMAGE:5770087" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3975 /gene="SYT9" /db_xref="GeneID:143425" /db_xref="HGNC:HGNC:19265" CDS 238..1713 /gene="SYT9" /codon_start=1 /product="synaptotagmin IX" /protein_id="AAH46367.1" /db_xref="GeneID:143425" /db_xref="HGNC:HGNC:19265" /translation="MPGARDALCHQALQLLAELCARGALEHDSCQDFIYHLRDRARPR LRDPDISVSLLTLVVTACGLALFGVSLFVSWKLCWVPWRERGLPSGSKDNNQEPLNYM DTETNEQENSEDFLDPPTPCPDSSMKISHTSPDIPLSTQTGIQENCAHGVRVQRQVTE PTSSARHNSIRRQLNLSNPDFNIQQLQKQEQLTGIGRIKPELYKQRSLDNDDGRRSNS KACGKLNFILKYDCDLEQLIVKIHKAVNLPAKDFSGTSDPYVKIYLLPDRKTKHQTKV HRKTLNPVFDEVFLFPVPYNDLEARKLHFSVYDFDRFSRHDLIGQVVVDHFLDLADFP RECILWKDIEYVTNDNVDLGELMFSLCYLPTAGRLTITIIKARNLKAMDITGASDPYV KVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPENIDQIHLSIAVMDYDRVGHN EIIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWHSLVEKR" BASE COUNT 1067 a 1010 c 958 g 940 t ORIGIN 1 cggagggacc gggcgggaga gagagaaagc ctgaccgacc ggctggcgaa gagctgcatg 61 caaccggtgg gaggccgggc cggctgggtc tggggctcgg gctcaggctc gcaccgtttc 121 tcggcaggtc cctggcggtg agcgcggacg gcccggaggc ggcggctctg agctggcagg 181 cggagggctg tctcctgcgc ccgcctgccc ggcgcggtcc gaggatgcgg gggggcgatg 241 cccggggcca gggacgcgct ctgtcaccag gcgctgcagc tgctggccga gctctgtgcc 301 cgtggggccc tggagcacga cagctgccag gatttcattt accacctgcg ggaccgtgcc 361 agaccccggc tccgcgaccc agatatctca gtgagcctgc tgacccttgt ggtcactgcc 421 tgtggtctcg ctctctttgg cgtgtctctc ttcgtatctt ggaaactctg ctgggttccg 481 tggcgagaac gaggcctgcc ctctggtagc aaagacaaca accaggagcc ccttaactac 541 atggacacag agaccaatga gcaggagaac agtgaggact tcctagaccc tcccacgccc 601 tgccctgact cctccatgaa gatcagccac acctcccctg acattcccct ctccacccag 661 acggggatcc aggagaactg tgcccatggc gtccgcgtgc agcgccaagt cacagagcca 721 acctcgtcgg cccggcataa ttcaatccga agacaactca acttgtcaaa cccggacttc 781 aatatccagc agcttcaaaa acaggaacag ttgactggaa ttggtagaat taaaccagag 841 ttatataagc agaggtcatt ggataatgat gacgggagac ggagtaacag caaggcttgt 901 gggaaactga acttcatttt aaaatatgac tgtgacttag agcagctcat agtgaagatt 961 cacaaagctg tcaatttgcc cgccaaggac ttttctggga cttcagatcc ttatgtcaag 1021 atctatttgc ttcctgatcg gaaaacaaaa caccagacta aagttcacag aaagaccctg 1081 aaccctgtgt ttgatgaagt gtttttattt ccggttccct acaatgacct tgaagcacgg 1141 aagcttcact tctctgtgta cgactttgac aggttctctc gtcatgactt aatcggccaa 1201 gtggtggtgg atcacttcct agacttggct gatttcccca gggagtgcat cctttggaag 1261 gatatcgaat atgtcaccaa tgacaacgtg gatctgggag agctgatgtt ttccctgtgc 1321 tatcttccaa cggctggcag gctgaccatt accattataa aagcaaggaa tttaaaggca 1381 atggacataa caggagcatc agatccctat gtgaaagtct cgctgatgtg tgatggcaga 1441 cgactgaaga agaggaaaac atccaccaag aggaacacct tgaatcctgt ttacaacgaa 1501 gccatagtct ttgatgtccc tcccgagaac attgaccaaa tccacttgtc catagcagtc 1561 atggactatg accgtgtagg tcacaatgag atcatcggcg tgtgtcaagt aggcaacgag 1621 gctgagaggc tgggcagaga ccactggagt gaaatgttgt catatcctcg gaagcccatt 1681 gcacactggc attccctggt ggagaaacga tgaccatggg taagaggact gcttgtgcca 1741 aggacaaaat aggacaacca tctcacaaag atcttaagta actttttcca tccagcaaca 1801 tccagacgat ttcagtgacc aaatgctcag ctgtaaccac agcactaact ggccttcttt 1861 ccagattggg tttggtgaac ctgaatggtc cagccacctt ctgcaggtgg cccaaggtga 1921 tgtgctgcag ggaagcatgt ctctcatgcc aagaaccaag atcggactat gaacaaaaac 1981 aaatgataga tatagtgaca gtaccaagag taccaggact cagtgtttca tatgaagccc 2041 ttggtgatga ggacatagca tctgccctgg aaatcgttat tccaacataa tattattttc 2101 tagaatgccc tggaaggaca gaatatttaa aaatatatcc aggtgctaaa taggcagcag 2161 atctcaattc acacatgact acctttgagc taatgactgt ctccagaaaa taactgtgcc 2221 ccaagaagtg ctccagattt gcaaggaata gccccaagag aataccaaga caagcaggct 2281 gttccctgga aaaaatctaa tgcaaggagg gctagttcac agcaaattca ctgcctcctc 2341 ccatgcacgt ggtagagagt accagtatca acatggccct gttttctgct aaaaccagat 2401 tttgaggaat cagagacccc caacactact cactcagtag ctagcagccc cttcctttca 2461 actgggagtg ttattagaat gaaaagtaat tagttagaag ggcatacatc tcagtggcat 2521 gagcattgtg gaatatcctt tcctaggcac atttgtccac taagggaaca gcctcagaaa 2581 ctggtacagc aatgggtgag atgagatcct ggagagagaa cacagccatc ccctatagaa 2641 aggcacagct tttgggcttc tctggcctga atgccttctg gggtatttcc atatgcaaca 2701 gcccagagtc atagccttgg gcaaccacac atagaggttt ccttctcact tcagacacat 2761 acatcacttt cacaccactt ggggatggaa atacctacaa gagtgaaggt caagggccct 2821 ccccaggcat ctcattcatt actcagcttc cttcctgacc aagtctgcca accaatggcc 2881 agctatgcgc ctcatcctca ttgcttctgc ctccacgtaa atgaaaccaa aggcctcagc 2941 atatcctggg aggactgggg gctgttacct aatggtcctc tctgtcccat tataggtgca 3001 aggcacccca tccacacatt tgcaccacta ctccaagata gtatttttct tttcacacaa 3061 tctctttaca gcagaatcca gagttggatt gtagtttacc ttcctggaaa gctcattatc 3121 tttgtttgaa ttaacatttc agcatggaac taactgggcg gaggaaggat cgttatacgt 3181 cttcagaaag ttctcattgc cccagctgcc tagtactata caagaagctc tactttgatg 3241 gcagatctaa gaaggctata ggcctttgtt tgtaggaagc agtgtcatta cattcaagct 3301 tcacttctct gattggcttc caaccactgg gattcaaaga gaatccaagg ttctgcctat 3361 gtctgatgac ataaggaaaa cttggcttcc tctgctcaag gttcccctct gctcatccct 3421 cctcattcag acatcctcca ccataccagt gtttagaagc aaaacatgaa gggctagcgc 3481 caccaggata gttagcagaa ctattgtctg taaagctagg cagatgagcc cagaagaatg 3541 gtcccagaga aagcagactg gctccaatag atatcaggca gcaatcccaa taaattctga 3601 catgtccttg gcaatggaag cctgggttgg agatcctgag gcagctgtgc ctactgttcc 3661 ccacctcaga agcttcctgc ccagagagcc agcagccttg ggatactaat gaggatgcaa 3721 ctggcttatt ggtatgaaat agaaggtggc tttgtagggg caagcaggca aagagtacta 3781 tccacatggc aggcaggtgg ctttgtgtct ggaaagcttt gcctagccag tacagctgtg 3841 agcagaggct ggttataaat ttgaactccc tcagcccatt tgcaactctg cctctgttct 3901 cttgcattct gtttggttgc cctttagttt cctagtaaat gctccttttg aaaaaaaaaa 3961 aaaaaaaaaa aaaaa //