LOCUS BC046248 1939 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens similar to CG32656-PA, mRNA (cDNA clone MGC:47837
IMAGE:6046539), complete cds.
ACCESSION BC046248
VERSION BC046248.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1939)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1939)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42821109.
FEATURES Location/Qualifiers
source 1..1939
/db_xref="H-InvDB:HIT000053026"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47837 IMAGE:6046539"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1939
/gene="LOC340602"
/gene_synonym="MGC47837"
/db_xref="GeneID:340602"
CDS 103..1614
/gene="LOC340602"
/gene_synonym="MGC47837"
/codon_start=1
/product="similar to CG32656-PA"
/protein_id="AAH46248.1"
/db_xref="GeneID:340602"
/translation="MATQSDMEKEQKHQQDEGQGGLNNETALASGDACGTGNQDPAAS
VTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQD
CRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQ
KPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRIT
LVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPG
PARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGH
RSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEV
PSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSS
PSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP"
BASE COUNT 358 a 680 c 492 g 409 t
ORIGIN
1 ggactggctg ggctccaccc accttcttgc tctaccagtt cgcgctctcc tccggcagaa
61 gtagcagctg cgctcttgct ctctggggga gaacctggcg ttatggccac tcagtcagac
121 atggagaagg agcagaagca ccagcaggac gaggggcagg gagggctgaa caacgaaacc
181 gcccttgcct ccggggatgc ctgcgggacc gggaatcaag atcctgctgc ttccgtcacc
241 acagtctcca gccaagcatc tccctcgggc ggcgccgccc taagcagcag cacagccggt
301 tcttccgctg cagccgccac ctccgccgcc attttcatca ccgatgaggc ctcggggctg
361 ccaatcatag ctgctgtgct gacggagagg cattctgacc gccaggactg ccgcagtcct
421 cacgaagttt ttgggtgtgt ggtgcccgag gggggcagcc aggccgctgt ggggccccag
481 aaggccactg gccacgccga cgagcacctg gcccagacca agagccccgg gaacagccgt
541 cgtaggaagc agccctgccg caaccaggct gccccggctc agaagcctcc agggcggcgt
601 ctgtttcctg agcctttgcc gccatcttct ccagggttcc ggcccagcag ctatccctgt
661 tccggggctt ctacttcgag tcaggcaacc cagccaggcc ctgcactcct aagccacgca
721 tctgaggcaa ggcctgctac ccgaagccgc atcaccctgg tagcttctgc tctccgcaga
781 cgtgcatctg gtccaggccc tgtcatccga ggctgcaccg cccagccagg ccctgctttt
841 ccacaccgcg ccactcatct agaccctgct cgtctaagcc ctgaatctgc gccaggccct
901 gcccgccgag gccgtgcatc tgtgccaggc cctgcccgcc gaggctgcga ttctgcgcca
961 ggccctgccc gccgaggccg cgattctgcg ccagtctctg ccccccgagg ccgcgattct
1021 gcgccaggct ctgcccgccg aggccgcgat tctgcgccag gccctgccct tcgcgtccgc
1081 acagcaaggt cagacgccgg tcatcgcagc accagcacga cgccaggcac tggcctccgg
1141 agccgttcca cccagcaaag atcagccctt ctcagccgcc gctctctgtc tgggtcagct
1201 gatgagaatc cttcctgtgg gactggctca gaaaggcttg cctttcagag cagatcaggc
1261 tctcctgatc ctgaggtccc aagccgtgct tccccgcctg tttggcatgc agtccgtatg
1321 cgtgcctcct caccctcacc ccctgggagg ttcttccttc ccatccctca gcagtgggat
1381 gagagctcct cctcctccta tgcttccaac tcctcctccc cgagtaggtc tcctggccta
1441 agcccctcat ccccttcccc tgagtttttg ggcctgagat ctatctccac tcctagccct
1501 gaaagcctta ggtatgcttt gatgcctgag ttttatgctc tgagccctgt ccctccagaa
1561 gagcaggcag aaatagagag cacagctcac cccgcaacac cgcctgagcc gtgaccctct
1621 ataagcatcc tctaagaccc acagaaggaa tcaacattta cccactttgt gaatgggctg
1681 cctgccctgt agttagctgc gaggtctccc aaagttccag ccgttaacca acatcctgag
1741 tagtttagaa gcctctcctc cccatgactc caccacctag cacttaacct gctgttggcc
1801 tttgattctg ggccaccttc ttcctcaaga gtttgccttt gcccttgagc tgagatttct
1861 gttttccaag ttgcttttct gttatgaaat gttttaatta gtaaaataaa ttgttttgtt
1921 taaaaaaaaa aaaaaaaaa
//