LOCUS BC046248 1939 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens similar to CG32656-PA, mRNA (cDNA clone MGC:47837 IMAGE:6046539), complete cds. ACCESSION BC046248 VERSION BC046248.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1939) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1939) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: n Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42821109. FEATURES Location/Qualifiers source 1..1939 /db_xref="H-InvDB:HIT000053026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:47837 IMAGE:6046539" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1939 /gene="LOC340602" /gene_synonym="MGC47837" /db_xref="GeneID:340602" CDS 103..1614 /gene="LOC340602" /gene_synonym="MGC47837" /codon_start=1 /product="similar to CG32656-PA" /protein_id="AAH46248.1" /db_xref="GeneID:340602" /translation="MATQSDMEKEQKHQQDEGQGGLNNETALASGDACGTGNQDPAAS VTTVSSQASPSGGAALSSSTAGSSAAAATSAAIFITDEASGLPIIAAVLTERHSDRQD CRSPHEVFGCVVPEGGSQAAVGPQKATGHADEHLAQTKSPGNSRRRKQPCRNQAAPAQ KPPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRIT LVASALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGPARRGRASVPG PARRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGH RSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEV PSRASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSYASNSSSPSRSPGLSPSS PSPEFLGLRSISTPSPESLRYALMPEFYALSPVPPEEQAEIESTAHPATPPEP" BASE COUNT 358 a 680 c 492 g 409 t ORIGIN 1 ggactggctg ggctccaccc accttcttgc tctaccagtt cgcgctctcc tccggcagaa 61 gtagcagctg cgctcttgct ctctggggga gaacctggcg ttatggccac tcagtcagac 121 atggagaagg agcagaagca ccagcaggac gaggggcagg gagggctgaa caacgaaacc 181 gcccttgcct ccggggatgc ctgcgggacc gggaatcaag atcctgctgc ttccgtcacc 241 acagtctcca gccaagcatc tccctcgggc ggcgccgccc taagcagcag cacagccggt 301 tcttccgctg cagccgccac ctccgccgcc attttcatca ccgatgaggc ctcggggctg 361 ccaatcatag ctgctgtgct gacggagagg cattctgacc gccaggactg ccgcagtcct 421 cacgaagttt ttgggtgtgt ggtgcccgag gggggcagcc aggccgctgt ggggccccag 481 aaggccactg gccacgccga cgagcacctg gcccagacca agagccccgg gaacagccgt 541 cgtaggaagc agccctgccg caaccaggct gccccggctc agaagcctcc agggcggcgt 601 ctgtttcctg agcctttgcc gccatcttct ccagggttcc ggcccagcag ctatccctgt 661 tccggggctt ctacttcgag tcaggcaacc cagccaggcc ctgcactcct aagccacgca 721 tctgaggcaa ggcctgctac ccgaagccgc atcaccctgg tagcttctgc tctccgcaga 781 cgtgcatctg gtccaggccc tgtcatccga ggctgcaccg cccagccagg ccctgctttt 841 ccacaccgcg ccactcatct agaccctgct cgtctaagcc ctgaatctgc gccaggccct 901 gcccgccgag gccgtgcatc tgtgccaggc cctgcccgcc gaggctgcga ttctgcgcca 961 ggccctgccc gccgaggccg cgattctgcg ccagtctctg ccccccgagg ccgcgattct 1021 gcgccaggct ctgcccgccg aggccgcgat tctgcgccag gccctgccct tcgcgtccgc 1081 acagcaaggt cagacgccgg tcatcgcagc accagcacga cgccaggcac tggcctccgg 1141 agccgttcca cccagcaaag atcagccctt ctcagccgcc gctctctgtc tgggtcagct 1201 gatgagaatc cttcctgtgg gactggctca gaaaggcttg cctttcagag cagatcaggc 1261 tctcctgatc ctgaggtccc aagccgtgct tccccgcctg tttggcatgc agtccgtatg 1321 cgtgcctcct caccctcacc ccctgggagg ttcttccttc ccatccctca gcagtgggat 1381 gagagctcct cctcctccta tgcttccaac tcctcctccc cgagtaggtc tcctggccta 1441 agcccctcat ccccttcccc tgagtttttg ggcctgagat ctatctccac tcctagccct 1501 gaaagcctta ggtatgcttt gatgcctgag ttttatgctc tgagccctgt ccctccagaa 1561 gagcaggcag aaatagagag cacagctcac cccgcaacac cgcctgagcc gtgaccctct 1621 ataagcatcc tctaagaccc acagaaggaa tcaacattta cccactttgt gaatgggctg 1681 cctgccctgt agttagctgc gaggtctccc aaagttccag ccgttaacca acatcctgag 1741 tagtttagaa gcctctcctc cccatgactc caccacctag cacttaacct gctgttggcc 1801 tttgattctg ggccaccttc ttcctcaaga gtttgccttt gcccttgagc tgagatttct 1861 gttttccaag ttgcttttct gttatgaaat gttttaatta gtaaaataaa ttgttttgtt 1921 taaaaaaaaa aaaaaaaaa //