LOCUS BC046242 3925 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens adaptor-related protein complex 1, beta 1 subunit, mRNA (cDNA clone MGC:52262 IMAGE:5929327), complete cds. ACCESSION BC046242 VERSION BC046242.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3925) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3925) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: p Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22027650. FEATURES Location/Qualifiers source 1..3925 /db_xref="H-InvDB:HIT000053023" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:52262 IMAGE:5929327" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_99" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..3925 /gene="AP1B1" /gene_synonym="ADTB1" /gene_synonym="AP105A" /gene_synonym="BAM22" /gene_synonym="CLAPB2" /db_xref="GeneID:162" /db_xref="MIM:600157" CDS 188..2947 /gene="AP1B1" /gene_synonym="ADTB1" /gene_synonym="AP105A" /gene_synonym="BAM22" /gene_synonym="CLAPB2" /codon_start=1 /product="AP1B1 protein" /protein_id="AAH46242.1" /db_xref="GeneID:162" /db_xref="MIM:600157" /translation="MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLI RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWG QIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDY YGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCV STLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIW IVGEYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLS LATQDSDNPDLRDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICY IGTLASVYHKPPSAFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPGEQPDVIPA QGDLLGDLLNLDLGPPVSGPPLATSSVQMGAVDLLGGGLDSLIGGTNFVAPPTAAVPA NLGAPIGSGLSDLFDLTSGVGTLSGSYVAPKAVGSISMDLQLTNKALQVMTDFAIQFN RNSFGLAPAAPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNIDVFYF STLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCPLNAEAASSKLQSSNIF TVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTLSLKCRAPEVSQHVYQAYE TILKN" misc_feature 236..1789 /gene="AP1B1" /gene_synonym="ADTB1" /gene_synonym="AP105A" /gene_synonym="BAM22" /gene_synonym="CLAPB2" /note="Adaptin_N; Region: Adaptin N terminal region. This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family" /db_xref="CDD:pfam01602" misc_feature 2333..2584 /gene="AP1B1" /gene_synonym="ADTB1" /gene_synonym="AP105A" /gene_synonym="BAM22" /gene_synonym="CLAPB2" /note="Alpha_adaptinC2; Region: pfam02883, Alpha_adaptinC2, Adaptin C-terminal domain. Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and gamma adaptins" /db_xref="CDD:pfam02883" BASE COUNT 857 a 1206 c 1143 g 719 t ORIGIN 1 cccgcgcgcg ggcagctcac ttccgcccgg caggtgacag ccgcggggct ccgagccgcc 61 ggcagcccgg acgcaccggg agagcgagag gtggaggccg cggacatttt ggtgccaagc 121 cgaaccgagc cggggcgccg ggagctattg ggacctgcgg aagcctggct acagataagg 181 gaccaaaatg actgactcaa aatatttcac cacgaccaag aaaggggaga tcttcgagct 241 gaaggcagag ctcaacagtg acaagaagga gaagaagaag gaggcagtga agaaagtgat 301 tgcatcgatg accgtgggca aagatgtcag tgccctcttc cccgatgtgg tcaactgcat 361 gcagacggac aacctggagc tgaagaagct ggtatacctc tacttgatga attacgccaa 421 gagtcagcct gacatggcca ttatggccgt caacaccttt gtgaaggact gtgaggaccc 481 caaccccctc atccgagccc tggcagtgcg gaccatgggc tgcatccgcg ttgacaagat 541 cacagagtac ctgtgcgagc cactccggaa gtgcctgaag gacgaggatc catatgtgcg 601 caagacagca gctgtgtgcg tggccaagct ccacgacatc aacgcccagc tggtggagga 661 ccagggcttc ctggacaccc ttaaagacct catctccgac tctaacccca tggtggtggc 721 caatgcagtg gcagcgctct cagaaattgc cgagtctcac cccagcagca acctgctcga 781 tctgaaccca cagtccatca acaagctgct gacagccctc aatgagtgca ccgagtgggg 841 ccagatcttc atcctggact gcctcgccaa ctatatgccc aaggacgacc gcgaggccca 901 gagcatctgt gagcgggtca cccccaggct ctcccatgcc aactccgctg tggtgctctc 961 tgctgtgaag gtgctgatga agttcatgga gatgttgtct aaggacttgg actactacgg 1021 cacactgctc aagaagctgg ccccacccct ggtcacactg ctgtcagccg agccagagct 1081 gcagtatgtg gccctgcgca acatcaatct catcgtgcag aaaaggcctg agatcctgaa 1141 gcatgagatg aaggtgttct tcgtgaagta caacgaccct atctacgtga agctggagaa 1201 gctggacatc atgatccgcc tggcctctca ggccaacatc gcccaggtgt tggcagagct 1261 gaaagagtac gcaacagaag tggatgtgga ctttgtacgg aaggctgtgc gtgctattgg 1321 ccgctgcgcc atcaaggtgg agcaatctgc ggagcgctgt gtgagcacgc tgctcgacct 1381 catccagacc aaggtcaact atgtggtcca ggaggccatc gtggtcatca aggacatctt 1441 ccgcaagtac cccaacaagt atgagagtgt gattgccaca ctgtgtgaga atctggactc 1501 cctggatgag cctgaggccc gggctgccat gatctggatt gtgggcgagt acgcggaacg 1561 gatcgacaac gcagatgagc tgctggagag cttcctcgag ggcttccatg acgagagcac 1621 acaggtccag ctgcagctgc tgacagccat tgtgaaactc tttctaaaga agccaacaga 1681 gacccaggag ctggtgcagc aggtcctcag tttggccact caggactcag ataacccaga 1741 cctgcgggac cgtggctaca tctactggcg cctgctgtcc acggacccgg tggcagccaa 1801 ggaggtggtg ttggctgaga agccactcat ctctgaagag acggacctca tcgagcccac 1861 actgttagac gagcttatct gctacatcgg cacgctggct tccgtctacc ataagcctcc 1921 cagtgccttt gtggaggggg gccggggcgt cgtgcacaag agcctgccac ctcgcacggc 1981 ctcgagtgag agcgcagaga gccctgagac agcccctact ggagcacctc ctggggagca 2041 gccagatgtc atccccgccc agggcgacct gctgggtgac ctcctcaacc tggacctcgg 2101 ccccccagtg agcggcccac ccctggccac ctcctcggtg cagatgggag ctgtggacct 2161 tcttggcggt ggccttgaca gcctgattgg gggcaccaac ttcgtggcac ctccaacagc 2221 agcagtacca gccaatcttg gagcacccat cggcagtggc ctgagtgacc tctttgacct 2281 gaccagtggc gtgggcaccc tgtcaggatc atatgtggcc cccaaagcag tgggctccat 2341 ctccatggac ctgcagctga ccaacaaggc cttgcaggtc atgaccgact ttgccatcca 2401 gttcaaccgc aacagctttg gcctggcccc cgccgccccc ctccaggtcc acgcaccact 2461 cagccccaac cagacagtgg agatctccct gcctctcagc acggtgggct cggtcatgaa 2521 gatggagcct ctgaacaacc tccaggtggc cgtgaagaac aacatcgatg tcttctactt 2581 cagcaccttg tacccactgc acatcctctt tgtggaggac gggaagatgg accggcagat 2641 gttcctggcc acatggaagg atattcccaa tgagaatgag gcccagttcc agatcagaga 2701 ctgccccctc aatgcagagg ctgcgagcag caagctgcag agcagcaaca tcttcactgt 2761 cgccaagagg aacgtggagg gccaggacat gctctaccag tccctgaagc tgaccaacgg 2821 catctgggtg ctggcggagc tgcggatcca gccgggcaac cccagctgca cgctgtccct 2881 gaagtgtcga gcaccagagg tgtcccagca cgtgtaccag gcctacgaga ccatcctcaa 2941 gaactgagac cccggccagc gcccacccca gccttctgcc cgccccatcg aggaggcccc 3001 tcgggggcag cacatcttcc tcctcgcagg agggaccagg cggggctcca ggccactcag 3061 tgggctccct ggtcctgatg gcagaaccca cccgatccct ggggtagggc accaccccct 3121 cctggggtga gagcgcagtg cactcccgtg ctctgggaca cccctgctcc tgtggctgtg 3181 atgtggggtt aagtgaggtg gggaccaaag gaaacagagc cagagcagcc acagaagctg 3241 tgcctgaagg gtgagtgtgg agcttgcccc tccggctcac agccccggca gcccctggct 3301 ccttggtctc tccggttggt gttaaagggc cctccactgc cacctctcat gggatggacc 3361 ctgccaacct ggcctgggtg tgcagggagg ggttcccctt ggtaccagga gagctgctca 3421 cttagggcct ggggctcaag gagctgtagg tgccggcaga ggggcagagc taggctggga 3481 ggagcccagg gcctgcacca cccacttgca accaccaggc tggtgccctg cagctgtgcc 3541 agttgggcca cagcctcccg agtgctgacc cacatggtca agaccaggca gaagctccca 3601 gagcccctgt ctcgggctcc ccaccgactg gcagctgcac tatccccaac tccccacttc 3661 tgccccaagg gtggtcactg cctgtgatac attcctcagt gtcgcctctg agcccaggcc 3721 tcctgccaca aagactgggc cgagagatgg ggctgggtaa gcgggtgcgc ctcctgtttg 3781 ggtttcttcg gggtttctct gtagtgtctg ctgccctcct cctggcctcc caggtttcag 3841 ttgtgtctga cagagcatta ggttttcctg ttactgctgt gtaataataa agaaagattc 3901 ggcaaaaaaa aaaaaaaaaa aaaaa //